Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTND5P18-201ENST00000445624 1801 ntBASIC-0.89□□□□□ -2.55
CISHQ9NSE2 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 SNORD116-2-201ENST00000384274 95 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 SNORD116-6-201ENST00000384711 96 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 MIR1302-11-201ENST00000408051 138 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 MIR1302-9-201ENST00000408365 138 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 MIR1265-201ENST00000408444 86 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 MIR1302-10-201ENST00000408734 138 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.9□□□□□ -2.55
CISHQ9NSE2 RNU6-287P-201ENST00000516230 98 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 MIR1302-2-201ENST00000607096 138 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 AP001362.1-201ENST00000625165 124 ntBASIC-0.9□□□□□ -2.55
CISHQ9NSE2 RNU6-502P-201ENST00000362419 108 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 SNORD115-25-201ENST00000362619 82 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 RNU6-571P-201ENST00000384128 107 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 RNU6-35P-201ENST00000384530 107 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.91□□□□□ -2.56
CISHQ9NSE2 AC093783.1-201ENST00000612976 329 ntBASIC-0.91□□□□□ -2.56
CISHQ9NSE2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
CISHQ9NSE2 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 SNORD95.1-201ENST00000364099 68 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 RNU6-381P-201ENST00000391259 108 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MTATP6P23-201ENST00000440153 476 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 SNORD116-25-201ENST00000516517 92 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.92□□□□□ -2.56
CISHQ9NSE2 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RNU6-728P-201ENST00000365375 104 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 Y_RNA.389-201ENST00000383924 113 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RNU6-472P-201ENST00000384299 107 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 MIR516A2-201ENST00000384888 90 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 MIR516A1-201ENST00000385033 90 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 MIR518B-201ENST00000385127 83 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 SNORA79-201ENST00000408376 140 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 AC016907.1-201ENST00000419483 435 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RNA5SP236-201ENST00000516169 116 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 SNORA40.17-201ENST00000517256 115 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 AC026407.1-201ENST00000518369 204 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.93□□□□□ -2.56
CISHQ9NSE2 AC080013.6-201ENST00000606185 215 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 RNU2-4P-201ENST00000606190 192 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 AC037487.3-201ENST00000606668 112 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 MIR376B-201ENST00000614515 100 ntBASIC-0.93□□□□□ -2.56
CISHQ9NSE2 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 RNU6-973P-201ENST00000364690 107 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 SNORA63.7-201ENST00000365579 123 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 SNORD83B-201ENST00000386745 93 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 RNU4-69P-201ENST00000410677 143 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 SNORD2.1-201ENST00000458762 69 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.94□□□□□ -2.56
CISHQ9NSE2 RNU6-976P-201ENST00000516086 111 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 SNORD22.1-201ENST00000516331 125 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 RNU6-850P-201ENST00000516934 103 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 MIR5704-201ENST00000584029 77 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 AC009779.6-201ENST00000603972 165 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 AC087741.2-201ENST00000619415 172 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 AC090574.1-201ENST00000623186 233 ntBASIC-0.94□□□□□ -2.56
CISHQ9NSE2 SNORD114-25-201ENST00000363742 72 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 MT-TL1-201ENST00000386347 75 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 AL589823.1-201ENST00000429577 183 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 AL500527.2-201ENST00000454105 95 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 RNU7-2P-201ENST00000516096 62 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.95□□□□□ -2.56
CISHQ9NSE2 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 SNORD115-35-201ENST00000365122 82 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 RNU6-476P-201ENST00000384726 107 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 RNU6-651P-201ENST00000411040 105 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 FGF7P6-202ENST00000451282 293 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.96□□□□□ -2.56
CISHQ9NSE2 U6.100-201ENST00000636230 99 ntBASIC-0.96□□□□□ -2.56
CISHQ9NSE2 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.97□□□□□ -2.56
CISHQ9NSE2 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.97□□□□□ -2.56
CISHQ9NSE2 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 290.4 ms