Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNY1P2-201ENST00000364820 117 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 Y_RNA.309-201ENST00000365046 111 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 Y_RNA.362-201ENST00000365518 110 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 RNU6-616P-201ENST00000384353 107 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 Y_RNA.507-201ENST00000384500 99 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 RNU6-476P-201ENST00000384726 107 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 RNU6-1064P-201ENST00000410626 104 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 Y_RNA.629-201ENST00000411368 105 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 UBL5P1-201ENST00000507979 193 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 SNORD92-201ENST00000585078 85 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 AL589743.1-201ENST00000551932 2712 ntBASIC1.17□□□□□ -2.22
VTA1Q9NP79 RNU6-369P-201ENST00000362515 102 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 Y_RNA.49-201ENST00000362714 112 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 RNU6-364P-201ENST00000384387 107 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 SNORD89-201ENST00000390981 114 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 PDCD5P2-201ENST00000507570 312 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.16□□□□□ -2.22
VTA1Q9NP79 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
VTA1Q9NP79 AC020891.4-201ENST00000605745 93 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.16□□□□□ -2.22
VTA1Q9NP79 SNORD116-21-201ENST00000384507 92 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 MIR206-201ENST00000384872 86 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU1-119P-201ENST00000391122 165 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU6-735P-201ENST00000410612 107 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU4-83P-201ENST00000410863 133 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU6-1018P-201ENST00000516577 106 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU6-1223P-201ENST00000517124 104 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
VTA1Q9NP79 AL162726.3-218ENST00000636401 95 ntBASIC1.15□□□□□ -2.23
VTA1Q9NP79 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 Y_RNA.281-201ENST00000364774 94 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 Y_RNA.291-201ENST00000364886 113 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 SNORD105-201ENST00000386910 85 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.14□□□□□ -2.23
VTA1Q9NP79 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 RNU7-48P-201ENST00000458875 63 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 RNU7-156P-201ENST00000517214 74 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 MIR4491-201ENST00000581087 68 ntBASIC1.14□□□□□ -2.23
VTA1Q9NP79 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.14□□□□□ -2.23
VTA1Q9NP79 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VTA1Q9NP79 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RNU4-58P-201ENST00000363192 141 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 SNORD114-26-201ENST00000363543 72 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RNU4-67P-201ENST00000364569 141 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RNU6-865P-201ENST00000364772 107 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 Y_RNA.328-201ENST00000365208 113 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 Y_RNA.344-201ENST00000365381 112 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VTA1Q9NP79 Y_RNA.540-201ENST00000384638 111 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 Y_RNA.588-201ENST00000391254 102 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 AC096949.1-201ENST00000412047 152 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 AC004941.2-201ENST00000427009 228 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 AP003327.1-201ENST00000529684 127 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 MTND5P34-201ENST00000568888 325 ntBASIC1.13□□□□□ -2.23
VTA1Q9NP79 RNA5SP325-201ENST00000363756 130 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 RNU6-409P-201ENST00000384114 104 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 SNORD38.2-201ENST00000384470 69 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR520F-201ENST00000384824 87 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR548A1-201ENST00000385041 97 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 AC211469.2-201ENST00000605461 205 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 Y_RNA.773-201ENST00000607168 90 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR6779-201ENST00000617283 64 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 MIR6515-201ENST00000619843 57 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 AP001362.1-201ENST00000625165 124 ntBASIC1.12□□□□□ -2.23
VTA1Q9NP79 Y_RNA.36-201ENST00000362602 112 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 Y_RNA.448-201ENST00000384185 108 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 RNU6-429P-201ENST00000384582 108 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 RNU6-1321P-201ENST00000390905 107 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 RNU6-521P-201ENST00000516663 105 ntBASIC1.11□□□□□ -2.23
VTA1Q9NP79 RNU6-403P-201ENST00000363163 104 ntBASIC1.1□□□□□ -2.23
VTA1Q9NP79 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
VTA1Q9NP79 RNU6-816P-201ENST00000390914 107 ntBASIC1.1□□□□□ -2.23
VTA1Q9NP79 RNU6-1268P-201ENST00000391214 107 ntBASIC1.1□□□□□ -2.23
VTA1Q9NP79 RNU6-1239P-201ENST00000391310 107 ntBASIC1.1□□□□□ -2.23
VTA1Q9NP79 Y_RNA.42-201ENST00000362660 108 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
VTA1Q9NP79 RNU6-733P-201ENST00000410759 104 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 RNU7-102P-201ENST00000458948 62 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 AC138749.4-201ENST00000563970 127 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 MIR8066-201ENST00000617280 78 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 AC105081.1-201ENST00000617727 106 ntBASIC1.09□□□□□ -2.23
VTA1Q9NP79 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
VTA1Q9NP79 RNA5SP133-201ENST00000363368 119 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 Y_RNA.155-201ENST00000363632 101 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 DEFB131E-201ENST00000532329 154 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 AC090897.1-201ENST00000580909 226 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 MIR1255B1-201ENST00000636325 63 ntBASIC1.08□□□□□ -2.24
VTA1Q9NP79 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.08□□□□□ -2.24
VTA1Q9NP79 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
VTA1Q9NP79 RNU6-1313P-201ENST00000362622 102 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms