Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SNORD114-10-201ENST00000363409 72 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.261-201ENST00000364631 102 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 RNU6-81P-201ENST00000365608 104 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 SNORD116-14-201ENST00000383894 92 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 SNORD116-17-201ENST00000383929 92 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 SNORD116-15-201ENST00000384445 92 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 SNORD116-19-201ENST00000384729 92 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.588-201ENST00000391254 102 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 RNU6-659P-201ENST00000516454 104 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 MIR4653-201ENST00000585107 83 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.773-201ENST00000607168 90 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 AC132825.6-201ENST00000638861 357 ntBASIC0.78□□□□□ -2.28
PCDH9Q9HC56 Y_RNA.448-201ENST00000384185 108 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 MIR206-201ENST00000384872 86 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 RNU6-1321P-201ENST00000390905 107 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 SNORD92-201ENST00000585078 85 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 AL365222.1-201ENST00000614661 98 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 MIR6866-201ENST00000638146 69 ntBASIC0.77□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.127-201ENST00000363386 109 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR489-201ENST00000384923 84 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR548D2-201ENST00000384955 97 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 RNU4-61P-201ENST00000411243 107 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR6082-201ENST00000613604 109 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR8066-201ENST00000617280 78 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR1255B1-201ENST00000636325 63 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 MIR3914-2-201ENST00000637339 95 ntBASIC0.76□□□□□ -2.29
PCDH9Q9HC56 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
PCDH9Q9HC56 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 RNY4P6-201ENST00000363667 96 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 MIR548A1-201ENST00000385041 97 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
PCDH9Q9HC56 RNU6-1307P-201ENST00000391012 103 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 RNA5SP222-201ENST00000411039 105 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.649-201ENST00000459077 103 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 RNU7-2P-201ENST00000516096 62 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 SNORD33.1-201ENST00000516213 88 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 RNU6-531P-201ENST00000516694 104 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.712-201ENST00000517011 92 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 AC138749.4-201ENST00000563970 127 ntBASIC0.75□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.119-201ENST00000363301 96 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 SNORD115-35-201ENST00000365122 82 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 MIR548A3-201ENST00000385297 97 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 SNORA7.5-201ENST00000410672 110 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 AC244098.3-201ENST00000424803 96 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 AL606753.1-201ENST00000427435 87 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 AC008267.6-201ENST00000441664 139 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 RNU6-1223P-201ENST00000517124 104 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
PCDH9Q9HC56 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
PCDH9Q9HC56 RNU6-865P-201ENST00000364772 107 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.344-201ENST00000365381 112 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU6-1117P-201ENST00000384525 104 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU7-48P-201ENST00000458875 63 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU6-62P-201ENST00000516526 102 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU6-521P-201ENST00000516663 105 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 RNU6-448P-201ENST00000517052 107 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 CYP3A137P-201ENST00000562436 69 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 AC090897.1-201ENST00000580909 226 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 U6.95-201ENST00000636931 70 ntBASIC0.73□□□□□ -2.29
PCDH9Q9HC56 SNORD115-19-201ENST00000363098 82 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.98-201ENST00000363109 102 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 SNORD115-18-201ENST00000363293 82 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 SNORD115-17-201ENST00000364612 82 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 MIR573-201ENST00000384964 99 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 Y_RNA.697-201ENST00000516776 113 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 MTND5P34-201ENST00000568888 325 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
PCDH9Q9HC56 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.29
PCDH9Q9HC56 RNU4-58P-201ENST00000363192 141 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 SNORA63.5-201ENST00000363548 123 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 Y_RNA.155-201ENST00000363632 101 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 Y_RNA.328-201ENST00000365208 113 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 RNA5SP117-201ENST00000365294 118 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 RNU6-22P-201ENST00000384355 107 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 RNU6-1194P-201ENST00000516208 104 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 RNU6-789P-201ENST00000517105 102 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 AC007012.1-201ENST00000567192 175 ntBASIC0.71□□□□□ -2.3
PCDH9Q9HC56 MIR101-2-201ENST00000362195 79 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 RNU4-67P-201ENST00000364569 141 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 RNY1P2-201ENST00000364820 117 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 Y_RNA.362-201ENST00000365518 110 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 RNU6-1154P-201ENST00000391001 104 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 AC002350.1-201ENST00000490759 375 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 MIR376B-201ENST00000614515 100 ntBASIC0.7□□□□□ -2.3
PCDH9Q9HC56 AL512310.12-203ENST00000640543 90 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms