Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Y_RNA.49-201ENST00000362714 112 ntBASIC0.21□□□□□ -2.38
VIPAS39Q9H9C1 SNORD28-201ENST00000384706 75 ntBASIC0.21□□□□□ -2.38
VIPAS39Q9H9C1 RNU7-121P-201ENST00000516604 62 ntBASIC0.21□□□□□ -2.38
VIPAS39Q9H9C1 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
VIPAS39Q9H9C1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-200P-201ENST00000364743 107 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.476-201ENST00000384347 108 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.552-201ENST00000384665 112 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 AC074198.2-201ENST00000508153 258 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 RNA5SP47-201ENST00000517230 109 ntBASIC0.2□□□□□ -2.38
VIPAS39Q9H9C1 SNORD114-10-201ENST00000363409 72 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-682P-201ENST00000363843 106 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.240-201ENST00000364469 95 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 RNU4-11P-201ENST00000365287 132 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 MIR193B-201ENST00000384907 83 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 RNU2-59P-201ENST00000410482 191 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.662-201ENST00000516028 97 ntBASIC0.19□□□□□ -2.38
VIPAS39Q9H9C1 RNY1P2-201ENST00000364820 117 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.298-201ENST00000364960 107 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-1318P-201ENST00000365389 103 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 MIRLET7F2-201ENST00000385277 83 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 RNU4-69P-201ENST00000410677 143 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-135P-201ENST00000516769 101 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 AC112693.2-201ENST00000556538 232 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 MIR4639-201ENST00000584938 69 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 AC108081.1-201ENST00000604358 221 ntBASIC0.18□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.251-201ENST00000364551 99 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-716P-201ENST00000365621 103 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 RNU7-120P-201ENST00000459334 63 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 MIR4500-201ENST00000579472 76 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 MIR6828-201ENST00000636181 60 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 AC091304.10-201ENST00000641554 121 ntBASIC0.17□□□□□ -2.38
VIPAS39Q9H9C1 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 RNU6-151P-201ENST00000364158 107 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.272-201ENST00000364696 102 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 RNY4P20-201ENST00000516678 93 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 AC069113.3-201ENST00000521019 150 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 MIR4752-201ENST00000579672 72 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 MIR6755-201ENST00000619993 66 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 MIR924-201ENST00000638017 53 ntBASIC0.16□□□□□ -2.38
VIPAS39Q9H9C1 Y_RNA.29-201ENST00000362570 113 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 MIR206-201ENST00000384872 86 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-460P-201ENST00000391158 108 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 AL603914.1-201ENST00000401964 204 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 RNU7-129P-201ENST00000516128 62 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 SNORA81.3-201ENST00000517283 198 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 MIR1273G-201ENST00000577677 100 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 MIR4514-201ENST00000581410 57 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 AC098479.1-201ENST00000609225 154 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 AL137067.1-201ENST00000615933 120 ntBASIC0.15□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.299-201ENST00000364973 94 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.441-201ENST00000384123 112 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-1135P-201ENST00000411083 103 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 RNA5SP480-201ENST00000516840 109 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 AC004792.1-201ENST00000614523 137 ntBASIC0.14□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-1130P-201ENST00000365434 107 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 MT-TG-201ENST00000387429 68 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-1307P-201ENST00000391012 103 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 SNORD77B-201ENST00000391112 67 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 PCNPP3-201ENST00000393579 471 ntBASIC0.13□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.8-201ENST00000362353 102 ntBASIC0.12□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.12□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-429P-201ENST00000384582 108 ntBASIC0.12□□□□□ -2.39
VIPAS39Q9H9C1 MIR548L-201ENST00000408303 86 ntBASIC0.12□□□□□ -2.39
VIPAS39Q9H9C1 AC108059.2-201ENST00000434626 151 ntBASIC0.12□□□□□ -2.39
VIPAS39Q9H9C1 SNORD114-26-201ENST00000363543 72 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.257-201ENST00000364596 102 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 SNORD116-18-201ENST00000383961 92 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-616P-201ENST00000384353 107 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 BX276092.1-201ENST00000427368 251 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 RNU7-48P-201ENST00000458875 63 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 AC138869.1-201ENST00000568623 124 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
VIPAS39Q9H9C1 SNORA9.1-201ENST00000362412 131 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.221-201ENST00000364248 96 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-915P-201ENST00000364943 103 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 RNU7-104P-201ENST00000459398 79 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 MIR548H5-201ENST00000580314 60 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.778-201ENST00000620203 90 ntBASIC0.1□□□□□ -2.39
VIPAS39Q9H9C1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 230.4 ms