Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC211469.2-201ENST00000605461 205 ntBASIC1.15□□□□□ -2.23
PIF1Q9H611 AL162726.3-218ENST00000636401 95 ntBASIC1.15□□□□□ -2.23
PIF1Q9H611 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
PIF1Q9H611 Y_RNA.140-201ENST00000363474 103 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 Y_RNA.155-201ENST00000363632 101 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 RNU4-67P-201ENST00000364569 141 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 Y_RNA.309-201ENST00000365046 111 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 Y_RNA.507-201ENST00000384500 99 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 RNU6-110P-201ENST00000384508 104 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 SNORA7.5-201ENST00000410672 110 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 RNU7-2P-201ENST00000516096 62 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 RNU6-521P-201ENST00000516663 105 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 RNU6-919P-201ENST00000516731 104 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.14□□□□□ -2.23
PIF1Q9H611 AC068339.1-201ENST00000526965 141 ntBASIC1.14□□□□□ -2.23
PIF1Q9H611 Y_RNA.49-201ENST00000362714 112 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU6-363P-201ENST00000362895 105 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU6-403P-201ENST00000363163 104 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU6-1107P-201ENST00000364817 104 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 SNORD115-35-201ENST00000365122 82 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 SNORA22-201ENST00000383907 134 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 Y_RNA.448-201ENST00000384185 108 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 MIR1912-201ENST00000410389 80 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU7-102P-201ENST00000458948 62 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 AC090897.1-201ENST00000580909 226 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
PIF1Q9H611 RNU4-58P-201ENST00000363192 141 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 U8.6-201ENST00000364939 135 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 MIR573-201ENST00000384964 99 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 RNU6-1321P-201ENST00000390905 107 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 RNY4P18-201ENST00000391107 89 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 SNORD99-201ENST00000408612 74 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 AL035461.1-201ENST00000421490 332 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 MIR4491-201ENST00000581087 68 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
PIF1Q9H611 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
PIF1Q9H611 RNA5SP432-201ENST00000362480 116 ntBASIC1.11□□□□□ -2.23
PIF1Q9H611 RNU6-409P-201ENST00000384114 104 ntBASIC1.11□□□□□ -2.23
PIF1Q9H611 RNU6-1307P-201ENST00000391012 103 ntBASIC1.11□□□□□ -2.23
PIF1Q9H611 MIR5009-201ENST00000578736 100 ntBASIC1.11□□□□□ -2.23
PIF1Q9H611 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
PIF1Q9H611 Y_RNA.42-201ENST00000362660 108 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 Y_RNA.98-201ENST00000363109 102 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNU6-865P-201ENST00000364772 107 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNY1P2-201ENST00000364820 117 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNU6-44P-201ENST00000384045 107 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 Y_RNA.588-201ENST00000391254 102 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNU6-733P-201ENST00000410759 104 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNU6-448P-201ENST00000517052 107 ntBASIC1.1□□□□□ -2.23
PIF1Q9H611 RNU6-1014P-201ENST00000383940 103 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 SNORA72.6-201ENST00000384520 129 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 MIR605-201ENST00000385078 83 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 RNU7-48P-201ENST00000458875 63 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 U6.109-201ENST00000636749 87 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 AL512310.12-203ENST00000640543 90 ntBASIC1.09□□□□□ -2.23
PIF1Q9H611 SNORA63.4-201ENST00000362763 126 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 Y_RNA.116-201ENST00000363292 103 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 RNA5SP133-201ENST00000363368 119 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 Y_RNA.323-201ENST00000365157 109 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 Y_RNA.328-201ENST00000365208 113 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 RNU6-679P-201ENST00000391003 106 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 AC096949.1-201ENST00000412047 152 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 AC004941.2-201ENST00000427009 228 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 AL603825.1-201ENST00000438481 80 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 DEFB131E-201ENST00000532329 154 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 MIR8066-201ENST00000617280 78 ntBASIC1.08□□□□□ -2.24
PIF1Q9H611 Y_RNA.174-201ENST00000363781 105 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 Y_RNA.360-201ENST00000365512 102 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 SNORD100-201ENST00000408573 76 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 RNU6-135P-201ENST00000516769 101 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 AC138749.4-201ENST00000563970 127 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.07□□□□□ -2.24
PIF1Q9H611 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 uc_338.28-201ENST00000612082 187 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 MIR376B-201ENST00000614515 100 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 AL157834.3-201ENST00000615543 103 ntBASIC1.07□□□□□ -2.24
PIF1Q9H611 Y_RNA.13-201ENST00000362403 112 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 RNA5SP117-201ENST00000365294 118 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 MIR34C-201ENST00000384831 77 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 MIR1302-5-201ENST00000408164 150 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 AL353813.1-201ENST00000440700 253 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 ACA64.5-201ENST00000516207 127 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 MIR4653-201ENST00000585107 83 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
PIF1Q9H611 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
PIF1Q9H611 Y_RNA.163-201ENST00000363702 113 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
PIF1Q9H611 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 AC108729.3-201ENST00000513484 108 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 RNU6-1018P-201ENST00000516577 106 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 SNORA25.16-201ENST00000516741 121 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 RNU7-10P-201ENST00000607194 63 ntBASIC1.05□□□□□ -2.24
PIF1Q9H611 AP001362.1-201ENST00000625165 124 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms