Protein–RNA interactions for Protein: Q9H4Z3

PCIF1, Phosphorylated CTD-interacting factor 1, humanhuman

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1Q9H4Z3 RNU6-785P-201ENST00000411324 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 AC141557.1-201ENST00000540982 400 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 AC138749.4-201ENST00000563970 127 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 U6.90-201ENST00000614007 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 U6.70-201ENST00000620287 104 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 U6.109-201ENST00000636749 87 ntBASIC1.37□□□□□ -2.19
PCIF1Q9H4Z3 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RNY3P2-201ENST00000362918 102 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RNU1-36P-201ENST00000365130 165 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 MIR1257-201ENST00000408490 117 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1018P-201ENST00000516577 106 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 AC020891.4-201ENST00000605745 93 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 AL512310.12-203ENST00000640543 90 ntBASIC1.36□□□□□ -2.19
PCIF1Q9H4Z3 RNA5SP133-201ENST00000363368 119 ntBASIC1.35□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-756P-201ENST00000383997 107 ntBASIC1.35□□□□□ -2.19
PCIF1Q9H4Z3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-766P-201ENST00000362478 107 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-832P-201ENST00000363319 107 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1099P-201ENST00000363533 107 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RNY1P2-201ENST00000364820 117 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 SNORA51.5-201ENST00000384126 131 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 MIR19B1-201ENST00000384829 87 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 RNU6-1006P-201ENST00000516998 103 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 MIR3613-201ENST00000579844 87 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 AP001362.1-201ENST00000625165 124 ntBASIC1.34□□□□□ -2.19
PCIF1Q9H4Z3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.98-201ENST00000363109 102 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.377-201ENST00000365644 108 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 MTATP6P29-201ENST00000415057 132 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-904P-201ENST00000516206 101 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 MIR4676-201ENST00000583078 72 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 AL442128.1-201ENST00000615151 90 ntBASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 MIR499A-201ENST00000384903 122 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 MIR590-201ENST00000385008 97 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 MIR1287-201ENST00000408492 90 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 RNU4-83P-201ENST00000410863 133 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-537P-201ENST00000517277 103 ntBASIC1.32□□□□□ -2.2
PCIF1Q9H4Z3 SNORA72.6-201ENST00000384520 129 ntBASIC1.31□□□□□ -2.2
PCIF1Q9H4Z3 MIR125B2-201ENST00000385128 89 ntBASIC1.31□□□□□ -2.2
PCIF1Q9H4Z3 SNORA25.16-201ENST00000516741 121 ntBASIC1.31□□□□□ -2.2
PCIF1Q9H4Z3 DEFB131E-201ENST00000532329 154 ntBASIC1.31□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 SNORA25.9-201ENST00000365087 128 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 MIR1827-201ENST00000408549 66 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 SNORD124-201ENST00000459577 104 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 AC090897.1-201ENST00000580909 226 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 MIR8066-201ENST00000617280 78 ntBASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 RNU4-36P-201ENST00000364294 144 ntBASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 MIR100-201ENST00000385259 80 ntBASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 AC067940.1-201ENST00000458411 300 ntBASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 MIR8070-201ENST00000616510 88 ntBASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
PCIF1Q9H4Z3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 Y_RNA.13-201ENST00000362403 112 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 SNORD38.1-201ENST00000363863 68 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-1113P-201ENST00000384348 107 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-109P-201ENST00000516364 107 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-184P-201ENST00000516514 107 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 RNU6-531P-201ENST00000516694 104 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 MIR4804-201ENST00000581683 73 ntBASIC1.28□□□□□ -2.2
PCIF1Q9H4Z3 MIR1-1-201ENST00000362147 71 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-32P-201ENST00000383948 107 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-13P-201ENST00000384248 107 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-12P-201ENST00000384604 107 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-41P-201ENST00000384741 107 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-977P-201ENST00000516411 103 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 MIR6082-201ENST00000613604 109 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 AC091304.10-201ENST00000641554 121 ntBASIC1.27□□□□□ -2.21
PCIF1Q9H4Z3 HSBP1P2-201ENST00000299671 229 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 RNU6-53P-201ENST00000365367 106 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 MIR938-201ENST00000401216 83 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 Y_RNA.659-201ENST00000515994 113 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 MIR4500-201ENST00000579472 76 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 SNORD92-201ENST00000585078 85 ntBASIC1.26□□□□□ -2.21
PCIF1Q9H4Z3 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms