Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC133485.1-201ENST00000567176 124 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 AC138907.6-201ENST00000568401 126 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 MIR6513-201ENST00000621188 64 ntBASIC0.92□□□□□ -2.26
HIPK3Q9H422 SNORD115-19-201ENST00000363098 82 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 SNORD115-18-201ENST00000363293 82 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 SNORD115-17-201ENST00000364612 82 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 RNU6-1335P-201ENST00000365426 107 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 RNU6-22P-201ENST00000384355 107 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 MIR938-201ENST00000401216 83 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 RNU7-56P-201ENST00000458744 62 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 RNU6-62P-201ENST00000516526 102 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 MIR4491-201ENST00000581087 68 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 AC025627.3-201ENST00000582078 182 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 U6.95-201ENST00000636931 70 ntBASIC0.91□□□□□ -2.26
HIPK3Q9H422 RNY4P6-201ENST00000363667 96 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HIPK3Q9H422 RNU6-616P-201ENST00000384353 107 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 Y_RNA.563-201ENST00000384707 108 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 MIR548D2-201ENST00000384955 97 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 Y_RNA.588-201ENST00000391254 102 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 RNU4-83P-201ENST00000410863 133 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 RNU7-156P-201ENST00000517214 74 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 AC105081.1-201ENST00000617727 106 ntBASIC0.9□□□□□ -2.27
HIPK3Q9H422 RNU6-364P-201ENST00000384387 107 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 MIR206-201ENST00000384872 86 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 SNORD105-201ENST00000386910 85 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 AL606753.1-201ENST00000427435 87 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 SNORD33.1-201ENST00000516213 88 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 MIR1273G-201ENST00000577677 100 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 SNORD92-201ENST00000585078 85 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.89□□□□□ -2.27
HIPK3Q9H422 Y_RNA.773-201ENST00000607168 90 ntBASIC0.89□□□□□ -2.27
HIPK3Q9H422 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-1168P-201ENST00000390831 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-447P-201ENST00000410293 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-1118P-201ENST00000410382 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-1076P-201ENST00000410397 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-355P-201ENST00000410427 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-791P-201ENST00000410467 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-705P-201ENST00000410601 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-1100P-201ENST00000410691 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-860P-201ENST00000410860 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-1217P-201ENST00000411276 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU6-785P-201ENST00000411324 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 RNU7-102P-201ENST00000458948 62 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 U6.90-201ENST00000614007 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 U6.70-201ENST00000620287 104 ntBASIC0.88□□□□□ -2.27
HIPK3Q9H422 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.88□□□□□ -2.27
HIPK3Q9H422 Y_RNA.30-201ENST00000362572 97 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 RNU6-403P-201ENST00000363163 104 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 SNORD115-35-201ENST00000365122 82 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 Y_RNA.344-201ENST00000365381 112 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 Y_RNA.353-201ENST00000365440 108 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 MIR520H-201ENST00000385126 88 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 RNU6-1321P-201ENST00000390905 107 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 RNU1-119P-201ENST00000391122 165 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 Y_RNA.649-201ENST00000459077 103 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 RNU7-2P-201ENST00000516096 62 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 ACA64.5-201ENST00000516207 127 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 RNU6-479P-201ENST00000516348 105 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 AC008608.1-201ENST00000603910 127 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 MIR8066-201ENST00000617280 78 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
HIPK3Q9H422 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
HIPK3Q9H422 Y_RNA.42-201ENST00000362660 108 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
HIPK3Q9H422 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 SNORD99-201ENST00000408612 74 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 AC138749.4-201ENST00000563970 127 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 MIR6082-201ENST00000613604 109 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 MIR1255B1-201ENST00000636325 63 ntBASIC0.86□□□□□ -2.27
HIPK3Q9H422 Y_RNA.13-201ENST00000362403 112 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 RNA5SP133-201ENST00000363368 119 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 RNA5SP205-201ENST00000364653 136 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 Y_RNA.448-201ENST00000384185 108 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 SNORA19-201ENST00000384737 128 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 MIR548A3-201ENST00000385297 97 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 RNU6-1154P-201ENST00000391001 104 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 RNU6-1307P-201ENST00000391012 103 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.85□□□□□ -2.27
HIPK3Q9H422 SNORA25.16-201ENST00000516741 121 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 AC007012.1-201ENST00000567192 175 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 AL670379.3-201ENST00000605040 251 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 U6.109-201ENST00000636749 87 ntBASIC0.85□□□□□ -2.27
HIPK3Q9H422 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 RNY1P2-201ENST00000364820 117 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 Y_RNA.362-201ENST00000365518 110 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 SNORA72.6-201ENST00000384520 129 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 MIR548A1-201ENST00000385041 97 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 RNU7-48P-201ENST00000458875 63 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 RNU6-313P-201ENST00000516317 112 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 RNU6-521P-201ENST00000516663 105 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 MIR4679-2-201ENST00000578358 77 ntBASIC0.84□□□□□ -2.27
HIPK3Q9H422 AL353765.1-201ENST00000605514 183 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 278.8 ms