Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.51□□□□□ -2.65
TRIM4Q9C037 RNY4-201ENST00000516507 96 ntBASIC-1.51□□□□□ -2.65
TRIM4Q9C037 RNU6-314P-201ENST00000516574 104 ntBASIC-1.51□□□□□ -2.65
TRIM4Q9C037 MIR3129-201ENST00000581095 76 ntBASIC-1.51□□□□□ -2.65
TRIM4Q9C037 MIR6818-201ENST00000621576 65 ntBASIC-1.51□□□□□ -2.65
TRIM4Q9C037 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNU6-524P-201ENST00000384270 107 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 MIR548I2-201ENST00000408348 149 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNU7-195P-201ENST00000458793 62 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 SNORD2-201ENST00000459163 69 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 MRPS35P2-201ENST00000508242 191 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNA5SP153-201ENST00000516498 76 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNU7-70P-201ENST00000516941 66 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 VN1R91P-201ENST00000594377 169 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 AL359881.1-201ENST00000602916 267 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.52□□□□□ -2.65
TRIM4Q9C037 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.52□□□□□ -2.65
TRIM4Q9C037 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 SNORD114-10-201ENST00000363409 72 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 SNORA32-201ENST00000384072 121 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 RNU6-571P-201ENST00000384128 107 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 MIR526A2-201ENST00000390198 65 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 RNU2-55P-201ENST00000411146 174 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 SEPT14P8-201ENST00000508026 178 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 AC097639.2-201ENST00000603159 172 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 C8orf59P2-201ENST00000603441 271 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 AL008718.3-201ENST00000610217 321 ntBASIC-1.53□□□□□ -2.65
TRIM4Q9C037 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 MIR548H1-201ENST00000408610 102 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 MTND1P34-201ENST00000438556 671 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.54□□□□□ -2.66
TRIM4Q9C037 SNORD113-5-201ENST00000607261 78 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 AC007485.1-201ENST00000616755 206 ntBASIC-1.54□□□□□ -2.66
TRIM4Q9C037 RNY4P14-201ENST00000363656 96 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU6-746P-201ENST00000384112 109 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU6-890P-201ENST00000384121 107 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNY3P14-201ENST00000384309 102 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU6-540P-201ENST00000384622 101 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU6-310P-201ENST00000384655 107 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 SNORD63B-201ENST00000411005 70 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 RNU6-592P-201ENST00000411333 103 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.55□□□□□ -2.66
TRIM4Q9C037 MIR2113-201ENST00000459007 91 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 AC007012.1-201ENST00000567192 175 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 MIR4500-201ENST00000579472 76 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 AC133104.2-201ENST00000615272 193 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 MIR6502-201ENST00000617296 76 ntBASIC-1.55□□□□□ -2.66
TRIM4Q9C037 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 RNU4-10P-201ENST00000364383 140 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 SNORA51.5-201ENST00000384126 131 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 MTATP6P19-201ENST00000413797 659 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 RNU6-506P-201ENST00000516553 94 ntBASIC-1.56□□□□□ -2.66
TRIM4Q9C037 SNORD18.1-201ENST00000363807 70 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 MIR582-201ENST00000365731 98 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 PMCHL1-202ENST00000423102 261 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 RNU7-113P-201ENST00000459273 62 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 RNU6-507P-201ENST00000516045 100 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.57□□□□□ -2.66
TRIM4Q9C037 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 RNA5SP86-201ENST00000390869 98 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 AL606845.1-201ENST00000404881 255 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 RNU4-14P-201ENST00000410858 122 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.58□□□□□ -2.66
TRIM4Q9C037 AC099799.1-201ENST00000439809 192 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 MIR5688-201ENST00000580619 83 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 AC006504.6-201ENST00000590142 199 ntBASIC-1.58□□□□□ -2.66
TRIM4Q9C037 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 RNU6-170P-201ENST00000362832 104 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 SNRPGP8-201ENST00000454064 226 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 RNU6-983P-201ENST00000516004 103 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 AC006006.1-201ENST00000603082 144 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 AC048344.4-201ENST00000619744 527 ntBASIC-1.59□□□□□ -2.66
TRIM4Q9C037 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.59□□□□□ -2.66
TRIM4Q9C037 MIR29B1-201ENST00000385015 81 ntBASIC-1.6□□□□□ -2.67
TRIM4Q9C037 MIR487B-201ENST00000385021 84 ntBASIC-1.6□□□□□ -2.67
TRIM4Q9C037 RNU6-762P-201ENST00000517107 102 ntBASIC-1.6□□□□□ -2.67
TRIM4Q9C037 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.61□□□□□ -2.67
TRIM4Q9C037 SNORD115-20-201ENST00000365099 82 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms