Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MIR516A2-201ENST00000384888 90 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR516A1-201ENST00000385033 90 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR518E-201ENST00000385252 88 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 RNU6-129P-201ENST00000391022 107 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR938-201ENST00000401216 83 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 NDUFB4P4-201ENST00000404822 243 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR1827-201ENST00000408549 66 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AC108938.1-201ENST00000451204 136 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AC244505.6-201ENST00000452829 130 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 snoU13.11-201ENST00000459219 104 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 TRAJ51-201ENST00000504127 63 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.809-201ENST00000516058 95 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 RNA5SP320-201ENST00000516263 124 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR3064-201ENST00000581130 66 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR4676-201ENST00000583078 72 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR5007-201ENST00000583098 95 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 MIR4536-1-201ENST00000583537 88 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AL645939.4-201ENST00000604495 135 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 uc_338.20-201ENST00000621563 178 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AC034229.5-201ENST00000624258 185 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 AP000553.5-201ENST00000641933 54 ntBASIC0.58□□□□□ -2.32
LCE3DQ9BYE3 SNORA71.3-201ENST00000362582 128 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU6-403P-201ENST00000363163 104 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.244-201ENST00000364484 109 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 SNORA25.9-201ENST00000365087 128 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU6-652P-201ENST00000365488 107 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR19B1-201ENST00000384829 87 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR520H-201ENST00000385126 88 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR676-201ENST00000390702 67 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 SUMO2P12-201ENST00000405924 140 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU6-380P-201ENST00000410207 107 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNA5SP425-201ENST00000410336 112 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 HMGN2P38-201ENST00000423806 265 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 SNORD109B-201ENST00000458961 67 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 SNORD109A-201ENST00000459128 67 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU7-106P-201ENST00000459514 67 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AC008413.1-201ENST00000511864 177 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNA5SP200-201ENST00000516360 103 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 RNU6-135P-201ENST00000516769 101 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AC079600.2-201ENST00000550076 130 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR4771-2-201ENST00000577758 74 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR4771-1-201ENST00000582617 74 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR4443-201ENST00000585052 53 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AC008739.3-201ENST00000603262 127 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 AC013244.2-201ENST00000603396 103 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MIR4662A-201ENST00000637499 67 ntBASIC0.57□□□□□ -2.32
LCE3DQ9BYE3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU4-32P-201ENST00000363404 141 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU6-686P-201ENST00000364839 107 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNA5SP160-201ENST00000364866 120 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 SNORD115-44-201ENST00000365391 82 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 Y_RNA.491-201ENST00000384417 107 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNVU1-14-201ENST00000384770 164 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR196B-201ENST00000384852 84 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR34B-201ENST00000385076 84 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU6-910P-201ENST00000390844 107 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU7-195P-201ENST00000458793 62 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 RNU7-40P-201ENST00000516397 64 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 SNORA70.22-201ENST00000517160 124 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR4285-201ENST00000581001 85 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR4804-201ENST00000581683 73 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR5002-201ENST00000584713 97 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AC046143.2-201ENST00000609789 160 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AC012314.7-201ENST00000619693 93 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 TRDV1-202ENST00000621643 102 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AC027335.2-201ENST00000624030 375 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 MIR1297-201ENST00000637311 77 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
LCE3DQ9BYE3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 MIR1-1-201ENST00000362147 71 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 MIRLET7A1-201ENST00000362295 80 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNU5F-1-201ENST00000362507 117 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 SNORA63.2-201ENST00000362603 126 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNU6-478P-201ENST00000363904 110 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNY4P3-201ENST00000365254 95 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNU6-364P-201ENST00000384387 107 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 RNU6-291P-201ENST00000384720 107 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 MIR200A-201ENST00000384875 90 ntBASIC0.55□□□□□ -2.32
LCE3DQ9BYE3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms