Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 SNORD58A-201ENST00000383875 65 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 RNU6-1201P-201ENST00000384227 107 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SALL3Q9BXA9 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 RNU7-45P-201ENST00000459460 63 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 MIR4285-201ENST00000581001 85 ntBASIC1.68□□□□□ -2.14
SALL3Q9BXA9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
SALL3Q9BXA9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.171-201ENST00000363760 102 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.340-201ENST00000365330 92 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.507-201ENST00000384500 99 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 RNU6-1307P-201ENST00000391012 103 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
SALL3Q9BXA9 RNU6-887P-201ENST00000410660 100 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 JTBP1-201ENST00000441314 247 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 RNU6-322P-201ENST00000516010 103 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 AC140658.3-201ENST00000567603 271 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 MIR4764-201ENST00000580680 88 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 MIR3660-201ENST00000584845 100 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 Z97988.1-201ENST00000637697 135 ntBASIC1.67□□□□□ -2.14
SALL3Q9BXA9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.57-201ENST00000362806 113 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 RNU6-439P-201ENST00000384188 106 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 U8.15-201ENST00000390947 134 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 AC023790.1-201ENST00000482174 347 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 UBL5P1-201ENST00000507979 193 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 RNU7-153P-201ENST00000516455 62 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 RNA5SP33-201ENST00000516687 98 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 AP000648.3-201ENST00000623539 4507 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.36-201ENST00000362602 112 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.545-201ENST00000384652 105 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 MIR520C-201ENST00000385005 87 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 SNORD77B-201ENST00000391112 67 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 MTND4LP19-201ENST00000403051 166 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 Y_RNA.609-201ENST00000410669 89 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 RNU6-1015P-201ENST00000517121 99 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SALL3Q9BXA9 MIR6779-201ENST00000617283 64 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
SALL3Q9BXA9 RNA5SP325-201ENST00000363756 130 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 Y_RNA.205-201ENST00000364128 113 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 RNU4-67P-201ENST00000364569 141 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 RNU6-733P-201ENST00000410759 104 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 AL450471.1-201ENST00000447509 127 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 AC103810.7-201ENST00000607821 91 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 MIR376B-201ENST00000614515 100 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 MIR7974-201ENST00000615835 79 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 MIR664A-201ENST00000626086 82 ntBASIC1.65□□□□□ -2.15
SALL3Q9BXA9 SNORA1.1-201ENST00000364671 133 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 Y_RNA.377-201ENST00000365644 108 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 MIR9-2-201ENST00000384838 87 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 MIR758-201ENST00000390227 88 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SALL3Q9BXA9 SNORA7.5-201ENST00000410672 110 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 AC090844.1-201ENST00000422019 156 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 snoU13.9-201ENST00000458927 103 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 Y_RNA.705-201ENST00000516862 110 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 MIR548AE2-201ENST00000583456 67 ntBASIC1.64□□□□□ -2.15
SALL3Q9BXA9 Y_RNA.155-201ENST00000363632 101 ntBASIC1.63□□□□□ -2.15
SALL3Q9BXA9 SNORA77B-201ENST00000578179 125 ntBASIC1.63□□□□□ -2.15
SALL3Q9BXA9 U7.4-201ENST00000614961 63 ntBASIC1.63□□□□□ -2.15
SALL3Q9BXA9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
SALL3Q9BXA9 SNORA7.1-201ENST00000363750 139 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 RNU6-86P-201ENST00000606534 107 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 MIR6515-201ENST00000619843 57 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 MIR8065-201ENST00000620577 100 ntBASIC1.62□□□□□ -2.15
SALL3Q9BXA9 SNORD116-10-201ENST00000363791 102 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 MIR34C-201ENST00000384831 77 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 AC087499.7-201ENST00000441958 109 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 RNU6-687P-201ENST00000516443 89 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 RNA5SP102-201ENST00000516865 106 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 RNU1-92P-201ENST00000517017 135 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 RNU7-35P-201ENST00000517174 62 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 MIR4421-201ENST00000578133 69 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 MIR4251-201ENST00000635819 61 ntBASIC1.61□□□□□ -2.15
SALL3Q9BXA9 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 SNORD45B-201ENST00000364617 72 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 RNU6-540P-201ENST00000384622 101 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 RNU6-602P-201ENST00000411155 105 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 HMGN1P33-201ENST00000432945 451 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 AC125388.1-201ENST00000459631 156 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
SALL3Q9BXA9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.6□□□□□ -2.15
SALL3Q9BXA9 RNU6-1313P-201ENST00000362622 102 ntBASIC1.59□□□□□ -2.16
SALL3Q9BXA9 RNU6-315P-201ENST00000362666 107 ntBASIC1.59□□□□□ -2.16
SALL3Q9BXA9 RNU6-1244P-201ENST00000363614 108 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms