Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC105081.1-201ENST00000617727 106 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NR1H4Q96RI1 PCNPP3-201ENST00000393579 471 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AC138749.4-201ENST00000563970 127 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AL359881.1-201ENST00000602916 267 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AC108081.1-201ENST00000604358 221 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AP001340.1-201ENST00000624405 217 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.215-201ENST00000364204 112 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 RNU6-647P-201ENST00000364243 107 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 RNY1P2-201ENST00000364820 117 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.420-201ENST00000384043 110 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.555-201ENST00000384673 110 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 AC108059.2-201ENST00000434626 151 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC022523.2-201ENST00000561045 150 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.114-201ENST00000363265 113 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 RNU6-429P-201ENST00000384582 108 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIR3671-201ENST00000580455 88 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIR4639-201ENST00000584938 69 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 U7.2-201ENST00000607576 63 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 MIR489-201ENST00000384923 84 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNU7-48P-201ENST00000458875 63 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 MIR548H5-201ENST00000580314 60 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.213-201ENST00000364178 111 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR206-201ENST00000384872 86 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR1270-201ENST00000459320 83 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNA5SP268-201ENST00000516828 124 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR3163-201ENST00000581592 73 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR7111-201ENST00000619751 72 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNU6-865P-201ENST00000364772 107 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR216A-201ENST00000385063 110 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR569-201ENST00000385228 96 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNA5SP136-201ENST00000410906 107 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNU7-2P-201ENST00000516096 62 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNA5SP227-201ENST00000516184 113 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNU7-6P-201ENST00000516845 62 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 AC021753.1-201ENST00000635724 168 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.180-201ENST00000363867 113 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.464-201ENST00000384282 110 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 SNORD28-201ENST00000384706 75 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RN7SKP19-201ENST00000516016 252 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 MTND5P41-201ENST00000517498 206 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC138869.1-201ENST00000568623 124 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AP001362.1-201ENST00000625165 124 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC091304.10-201ENST00000641554 121 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.343-201ENST00000365354 112 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 MIR1263-201ENST00000408324 86 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 SUMO1P3-201ENST00000439961 304 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 MIR4500-201ENST00000579472 76 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
NR1H4Q96RI1 RNU6-616P-201ENST00000384353 107 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 MIR3668-201ENST00000582138 75 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.35
NR1H4Q96RI1 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORA63.5-201ENST00000363548 123 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORD115-35-201ENST00000365122 82 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 AC244669.1-204ENST00000621564 178 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR635-201ENST00000384830 98 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR613-201ENST00000385248 95 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 230.8 ms