Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC105081.1-201ENST00000617727 106 ntBASIC0.45□□□□□ -2.34
NR1H4Q96RI1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
NR1H4Q96RI1 PCNPP3-201ENST00000393579 471 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AC138749.4-201ENST00000563970 127 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AL359881.1-201ENST00000602916 267 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AC108081.1-201ENST00000604358 221 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 AP001340.1-201ENST00000624405 217 ntBASIC0.44□□□□□ -2.34
NR1H4Q96RI1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.215-201ENST00000364204 112 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 RNU6-647P-201ENST00000364243 107 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 RNY1P2-201ENST00000364820 117 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.420-201ENST00000384043 110 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 SNORA8.2-201ENST00000384372 139 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.555-201ENST00000384673 110 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
NR1H4Q96RI1 AC108059.2-201ENST00000434626 151 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC022523.2-201ENST00000561045 150 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 RNU7-10P-201ENST00000607194 63 ntBASIC0.42□□□□□ -2.34
NR1H4Q96RI1 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 Y_RNA.114-201ENST00000363265 113 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 RNU6-429P-201ENST00000384582 108 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIR3671-201ENST00000580455 88 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIR4639-201ENST00000584938 69 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 U7.2-201ENST00000607576 63 ntBASIC0.41□□□□□ -2.34
NR1H4Q96RI1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
NR1H4Q96RI1 MIRLET7D-201ENST00000362263 87 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.98-201ENST00000363109 102 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.488-201ENST00000384403 102 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 MIR489-201ENST00000384923 84 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNU7-48P-201ENST00000458875 63 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 RNA5SP436-201ENST00000516020 115 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 MIR548H5-201ENST00000580314 60 ntBASIC0.4□□□□□ -2.35
NR1H4Q96RI1 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.213-201ENST00000364178 111 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.448-201ENST00000384185 108 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR598-201ENST00000384868 97 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR206-201ENST00000384872 86 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNU6-1321P-201ENST00000390905 107 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR1270-201ENST00000459320 83 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNA5SP268-201ENST00000516828 124 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR3163-201ENST00000581592 73 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 MIR7111-201ENST00000619751 72 ntBASIC0.39□□□□□ -2.35
NR1H4Q96RI1 RNU6-865P-201ENST00000364772 107 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR216A-201ENST00000385063 110 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR569-201ENST00000385228 96 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNA5SP136-201ENST00000410906 107 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNU7-2P-201ENST00000516096 62 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNA5SP227-201ENST00000516184 113 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 RNU7-6P-201ENST00000516845 62 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 AC021753.1-201ENST00000635724 168 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.180-201ENST00000363867 113 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.464-201ENST00000384282 110 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 SNORD28-201ENST00000384706 75 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RNU6-1104P-201ENST00000384723 104 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 RN7SKP19-201ENST00000516016 252 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 MTND5P41-201ENST00000517498 206 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC138869.1-201ENST00000568623 124 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AP001362.1-201ENST00000625165 124 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 AC091304.10-201ENST00000641554 121 ntBASIC0.37□□□□□ -2.35
NR1H4Q96RI1 SNORA36.1-201ENST00000363424 132 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 Y_RNA.343-201ENST00000365354 112 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 MIR1263-201ENST00000408324 86 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 SUMO1P3-201ENST00000439961 304 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 MIR4500-201ENST00000579472 76 ntBASIC0.36□□□□□ -2.35
NR1H4Q96RI1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.36□□□□□ -2.35
NR1H4Q96RI1 RNU6-616P-201ENST00000384353 107 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 MIR3668-201ENST00000582138 75 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 TUG1_4.1-201ENST00000619464 181 ntBASIC0.35□□□□□ -2.35
NR1H4Q96RI1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.35
NR1H4Q96RI1 SNORD44.1-201ENST00000363202 61 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORA63.5-201ENST00000363548 123 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 Y_RNA.198-201ENST00000364013 98 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORD115-35-201ENST00000365122 82 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 Y_RNA.328-201ENST00000365208 113 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 AC244669.1-204ENST00000621564 178 ntBASIC0.34□□□□□ -2.36
NR1H4Q96RI1 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR635-201ENST00000384830 98 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR613-201ENST00000385248 95 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
NR1H4Q96RI1 RNU2-59P-201ENST00000410482 191 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms