Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 RNU7-10P-201ENST00000607194 63 ntBASIC-0.29□□□□□ -2.46
VPS35Q96QK1 MIR1295B-201ENST00000636144 60 ntBASIC-0.29□□□□□ -2.46
VPS35Q96QK1 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.3□□□□□ -2.46
VPS35Q96QK1 RNA5SP163-201ENST00000410304 99 ntBASIC-0.3□□□□□ -2.46
VPS35Q96QK1 AC104692.1-201ENST00000472406 90 ntBASIC-0.3□□□□□ -2.46
VPS35Q96QK1 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.3□□□□□ -2.46
VPS35Q96QK1 AC073869.9-201ENST00000641610 120 ntBASIC-0.3□□□□□ -2.46
VPS35Q96QK1 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.31□□□□□ -2.46
VPS35Q96QK1 SNORD41.1-201ENST00000391000 69 ntBASIC-0.31□□□□□ -2.46
VPS35Q96QK1 SNORD127-201ENST00000458892 86 ntBASIC-0.31□□□□□ -2.46
VPS35Q96QK1 RNU6-180P-201ENST00000516697 61 ntBASIC-0.31□□□□□ -2.46
VPS35Q96QK1 AC011603.4-201ENST00000611325 277 ntBASIC-0.31□□□□□ -2.46
VPS35Q96QK1 SNORD27-201ENST00000363981 72 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 MTND2P23-201ENST00000422990 651 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 MIR3925-201ENST00000584674 77 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 U6.106-201ENST00000636360 105 ntBASIC-0.32□□□□□ -2.46
VPS35Q96QK1 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 MIR1270-201ENST00000459320 83 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 RNU6-240P-201ENST00000516098 97 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 AL117187.1-201ENST00000555482 181 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 AC138907.4-201ENST00000570107 226 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 MIR4677-201ENST00000584153 80 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 AC021443.1-201ENST00000604478 211 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 uc_338.28-201ENST00000612082 187 ntBASIC-0.33□□□□□ -2.46
VPS35Q96QK1 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 RNU6-449P-201ENST00000383914 107 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 RNU6-768P-201ENST00000384683 107 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 MIR635-201ENST00000384830 98 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 MIR599-201ENST00000385069 95 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.34□□□□□ -2.46
VPS35Q96QK1 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 RNU6-818P-201ENST00000364837 108 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 AC097635.1-201ENST00000450678 155 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 RNU7-164P-201ENST00000459221 62 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 TRAJ51-201ENST00000504127 63 ntBASIC-0.35□□□□□ -2.47
VPS35Q96QK1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.35□□□□□ -2.47
VPS35Q96QK1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 MIR206-201ENST00000384872 86 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 SNORA75.1-201ENST00000391130 148 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 RNU4-69P-201ENST00000410677 143 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 MTATP6P21-201ENST00000440681 189 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 RNU7-48P-201ENST00000458875 63 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 RNU2-60P-201ENST00000517290 128 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 MIR4500-201ENST00000579472 76 ntBASIC-0.36□□□□□ -2.47
VPS35Q96QK1 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 SNORD58.1-201ENST00000391313 66 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 AC006210.1-201ENST00000424882 111 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 RNU7-123P-201ENST00000515911 60 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 AL670379.3-201ENST00000605040 251 ntBASIC-0.37□□□□□ -2.47
VPS35Q96QK1 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 MIR606-201ENST00000384851 96 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 MIR3149-201ENST00000584629 83 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 AC008737.2-201ENST00000599446 118 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 MIR6759-201ENST00000638110 65 ntBASIC-0.38□□□□□ -2.47
VPS35Q96QK1 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 SNORD77B-201ENST00000391112 67 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 SNORA75.5-201ENST00000391291 81 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 SNORD110-201ENST00000408189 75 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 AC107027.2-201ENST00000512197 115 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 NAMPTP3-201ENST00000569273 224 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
VPS35Q96QK1 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.4□□□□□ -2.47
VPS35Q96QK1 RNU6-509P-201ENST00000363519 107 ntBASIC-0.4□□□□□ -2.47
VPS35Q96QK1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.4□□□□□ -2.47
VPS35Q96QK1 BX276092.1-201ENST00000427368 251 ntBASIC-0.4□□□□□ -2.47
VPS35Q96QK1 AP001362.1-201ENST00000625165 124 ntBASIC-0.4□□□□□ -2.47
VPS35Q96QK1 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 RNU6-918P-201ENST00000391219 106 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 MIR876-201ENST00000401147 81 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 MIR548I2-201ENST00000408348 149 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 HMGN2P22-201ENST00000427588 175 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 RNA5SP484-201ENST00000458857 111 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 RNU4-71P-201ENST00000516258 113 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
VPS35Q96QK1 CR383656.4-201ENST00000546909 122 ntBASIC-0.41□□□□□ -2.48
VPS35Q96QK1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms