Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU2-35P-201ENST00000516446 142 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.53□□□□□ -2.49
RPRD1AQ96P16 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 SNORA25.7-201ENST00000364375 127 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 MIR635-201ENST00000384830 98 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 MT-TW-201ENST00000387382 68 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 AC097635.1-201ENST00000450678 155 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 RNA5SP236-201ENST00000516169 116 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 RNU2-4P-201ENST00000606190 192 ntBASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.54□□□□□ -2.5
RPRD1AQ96P16 MIR148A-201ENST00000362215 68 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 RNU6-690P-201ENST00000365242 106 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 BX276092.1-201ENST00000427368 251 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 AC084368.1-201ENST00000620935 65 ntBASIC-0.55□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 MTATP6P23-201ENST00000440153 476 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 RNA5SP395-201ENST00000516567 118 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 MIR4500-201ENST00000579472 76 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 MIR4493-201ENST00000584016 73 ntBASIC-0.56□□□□□ -2.5
RPRD1AQ96P16 RNU6-509P-201ENST00000363519 107 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 RNU6-865P-201ENST00000364772 107 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 RNU6-493P-201ENST00000391321 108 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 MIR8064-201ENST00000612863 90 ntBASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.57□□□□□ -2.5
RPRD1AQ96P16 RNA5SP98-201ENST00000363158 137 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 SNORD49B-201ENST00000365172 72 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 SNORA33.2-201ENST00000365413 134 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 MIR3920-201ENST00000581751 86 ntBASIC-0.58□□□□□ -2.5
RPRD1AQ96P16 MIR101-1-201ENST00000362265 75 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 RNA5SP300-201ENST00000391197 107 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 MIR1302-6-201ENST00000408466 90 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 MIR8062-201ENST00000621515 85 ntBASIC-0.59□□□□□ -2.5
RPRD1AQ96P16 RNU6-639P-201ENST00000384074 107 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 MIR206-201ENST00000384872 86 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 MIR516B1-201ENST00000385211 90 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 RNU7-48P-201ENST00000458875 63 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 RNU6-635P-201ENST00000516651 102 ntBASIC-0.6□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 RNU6-240P-201ENST00000516098 97 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 AC011603.4-201ENST00000611325 277 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 U6.104-201ENST00000637979 90 ntBASIC-0.61□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 RNU6-472P-201ENST00000384299 107 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 MIR196A2-201ENST00000385189 110 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 RNU4-69P-201ENST00000410677 143 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 AC021443.1-201ENST00000604478 211 ntBASIC-0.62□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNU6-238P-201ENST00000363313 106 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNU6-275P-201ENST00000364910 107 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNY4P28-201ENST00000365281 93 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 SNORD14C-201ENST00000365382 88 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 MIR519A1-201ENST00000385257 85 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 MIR548I2-201ENST00000408348 149 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 MIR1265-201ENST00000408444 86 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNU7-195P-201ENST00000458793 62 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 RNU7-13P-201ENST00000516413 62 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 AC138907.4-201ENST00000570107 226 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 MIR4308-201ENST00000580634 81 ntBASIC-0.63□□□□□ -2.51
RPRD1AQ96P16 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 AC244250.2-201ENST00000418731 148 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 RNU7-164P-201ENST00000459221 62 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 MTATP8P1-201ENST00000467115 207 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 MTND1P19-201ENST00000511780 315 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 RNU7-123P-201ENST00000515911 60 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 MIR548AZ-201ENST00000616567 95 ntBASIC-0.64□□□□□ -2.51
RPRD1AQ96P16 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 MTCYBP6-201ENST00000441810 138 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 MTND5P40-201ENST00000559945 246 ntBASIC-0.65□□□□□ -2.51
RPRD1AQ96P16 MIR6507-201ENST00000613630 70 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms