Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 RNU4-70P-201ENST00000384579 139 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 MIR145-201ENST00000384967 88 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 MIR548H3-201ENST00000408771 118 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 AC244505.6-201ENST00000452829 130 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 RNU7-104P-201ENST00000459398 79 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 MIR4305-201ENST00000583252 102 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 AC141273.2-201ENST00000618989 130 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 AL162376.1-201ENST00000624117 175 ntBASIC-0.04□□□□□ -2.42
ZNF560Q96MR9 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 RNU6-694P-201ENST00000364071 147 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 SNORA25.7-201ENST00000364375 127 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 AL022718.1-201ENST00000412004 84 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 TRAJ51-201ENST00000504127 63 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 AC108081.1-201ENST00000604358 221 ntBASIC-0.05□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-161P-201ENST00000363051 106 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNA5SP403-201ENST00000363598 108 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-818P-201ENST00000364837 108 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 MIR206-201ENST00000384872 86 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-269P-201ENST00000391077 97 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 RNU6-588P-201ENST00000410281 105 ntBASIC-0.06□□□□□ -2.42
ZNF560Q96MR9 SNORA63-201ENST00000363450 132 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 MT-TI-201ENST00000387365 69 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 BX276092.1-201ENST00000427368 251 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 RNU7-164P-201ENST00000459221 62 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 MIR3925-201ENST00000584674 77 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 AC021443.1-201ENST00000604478 211 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 AC098479.1-201ENST00000609225 154 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 AC067863.3-201ENST00000624172 122 ntBASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.07□□□□□ -2.42
ZNF560Q96MR9 MIR101-2-201ENST00000362195 79 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 SNORD114-10-201ENST00000363409 72 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 RNU6-309P-201ENST00000364573 106 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 MIR106A-201ENST00000384870 81 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 MIR610-201ENST00000385139 96 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AL118496.2-201ENST00000448300 230 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC138869.1-201ENST00000568623 124 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC138907.4-201ENST00000570107 226 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC130289.1-201ENST00000577321 73 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 AC009779.6-201ENST00000603972 165 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 uc_338.28-201ENST00000612082 187 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 RNU6-616P-201ENST00000384353 107 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 SNORD41.1-201ENST00000391000 69 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 AL603914.1-201ENST00000401964 204 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 HMGN2P22-201ENST00000427588 175 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 RNA5SP484-201ENST00000458857 111 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 RNU6-327P-201ENST00000516270 127 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 RNU6-782P-201ENST00000516852 104 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 MIR4677-201ENST00000584153 80 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 MIR548AD-201ENST00000584780 82 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 AC062037.2-201ENST00000610137 73 ntBASIC-0.09□□□□□ -2.42
ZNF560Q96MR9 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNU6-865P-201ENST00000364772 107 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 MIR599-201ENST00000385069 95 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNU4-69P-201ENST00000410677 143 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNU7-195P-201ENST00000458793 62 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNU4-71P-201ENST00000516258 113 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNY4P20-201ENST00000516678 93 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 IGKV1-22-201ENST00000524313 326 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 MIR4500-201ENST00000579472 76 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 MIR4503-201ENST00000582187 83 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 MIR376B-201ENST00000614515 100 ntBASIC-0.1□□□□□ -2.43
ZNF560Q96MR9 RNA5SP257-201ENST00000363023 116 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.11□□□□□ -2.43
ZNF560Q96MR9 RNU6-449P-201ENST00000383914 107 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms