Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC138907.4-201ENST00000570107 226 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 MIR548AE2-201ENST00000583456 67 ntBASIC0.32□□□□□ -2.36
SNRNP40Q96DI7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 SNORD118-201ENST00000363593 134 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 SNORA8.2-201ENST00000384372 139 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 RNU6-291P-201ENST00000384720 107 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 SNORD37.2-201ENST00000391075 66 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.584-201ENST00000391090 114 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 AL603914.1-201ENST00000401964 204 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.662-201ENST00000516028 97 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 SNORA31.14-201ENST00000516728 116 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 RNU6-135P-201ENST00000516769 101 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 RNU7-137P-201ENST00000516788 62 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 AC021443.1-201ENST00000604478 211 ntBASIC0.31□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.257-201ENST00000364596 102 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 SNORA81.3-201ENST00000517283 198 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 AC105081.1-201ENST00000617727 106 ntBASIC0.3□□□□□ -2.36
SNRNP40Q96DI7 RNU4-67P-201ENST00000364569 141 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.272-201ENST00000364696 102 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 RNU6-535P-201ENST00000384722 107 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 RNU7-164P-201ENST00000459221 62 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 MIR1270-201ENST00000459320 83 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 RNU7-123P-201ENST00000515911 60 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 RNA5SP395-201ENST00000516567 118 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 RNU6-531P-201ENST00000516694 104 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 AL359881.1-201ENST00000602916 267 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 AC004792.1-201ENST00000614523 137 ntBASIC0.29□□□□□ -2.36
SNRNP40Q96DI7 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 RNA5SP133-201ENST00000363368 119 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 SNORD114-10-201ENST00000363409 72 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 SNORD67.1-201ENST00000516618 108 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 AC112693.2-201ENST00000556538 232 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 AC098479.1-201ENST00000609225 154 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 MIR6828-201ENST00000636181 60 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 U6.109-201ENST00000636749 87 ntBASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.28□□□□□ -2.36
SNRNP40Q96DI7 RNU4-58P-201ENST00000363192 141 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 RNU6-309P-201ENST00000364573 106 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 SNORD18B-201ENST00000365659 72 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 RNU7-197P-201ENST00000458836 62 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.690-201ENST00000516603 95 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 AC138749.4-201ENST00000563970 127 ntBASIC0.27□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.298-201ENST00000364960 107 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 RNU4-11P-201ENST00000365287 132 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.580-201ENST00000391004 95 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 RNU4-69P-201ENST00000410677 143 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 AC074198.2-201ENST00000508153 258 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 RNU6-863P-201ENST00000515989 104 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 SCARNA16.5-201ENST00000517114 183 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 RNA5SP47-201ENST00000517230 109 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
SNRNP40Q96DI7 RNA5SP245-201ENST00000364239 121 ntBASIC0.25□□□□□ -2.37
SNRNP40Q96DI7 SNRPGP12-201ENST00000449481 213 ntBASIC0.25□□□□□ -2.37
SNRNP40Q96DI7 RNA5SP268-201ENST00000516828 124 ntBASIC0.25□□□□□ -2.37
SNRNP40Q96DI7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 SNORA63.5-201ENST00000363548 123 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 RNY1P2-201ENST00000364820 117 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 SNORD28-201ENST00000384706 75 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 MIRLET7F2-201ENST00000385277 83 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 RNU6-394P-201ENST00000410735 107 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 AC108081.1-201ENST00000604358 221 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 MIR6718-201ENST00000616153 80 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.778-201ENST00000620203 90 ntBASIC0.24□□□□□ -2.37
SNRNP40Q96DI7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 RNA5SP285-201ENST00000516619 119 ntBASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 MIR7107-201ENST00000611489 80 ntBASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 AL137067.1-201ENST00000615933 120 ntBASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
SNRNP40Q96DI7 MIR101-2-201ENST00000362195 79 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 RNU6-1130P-201ENST00000365434 107 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 RNU6-449P-201ENST00000383914 107 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 RNY4P20-201ENST00000516678 93 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 AC067863.3-201ENST00000624172 122 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 AC091304.10-201ENST00000641554 121 ntBASIC0.22□□□□□ -2.37
SNRNP40Q96DI7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 RNU6-151P-201ENST00000364158 107 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 RNU6-35P-201ENST00000384530 107 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 MIR206-201ENST00000384872 86 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 RNU2-59P-201ENST00000410482 191 ntBASIC0.21□□□□□ -2.38
SNRNP40Q96DI7 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms