Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1□□□□□ -2.57
LRRC39Q96DD0 MIR20A-201ENST00000362279 71 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.16-201ENST00000362421 102 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.117-201ENST00000363294 101 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.127-201ENST00000363386 109 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 RNU4-36P-201ENST00000364294 144 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 RNU6-1062P-201ENST00000383908 107 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 RNU6-901P-201ENST00000384593 106 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 MT-TL1-201ENST00000386347 75 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 RNU6-381P-201ENST00000391259 108 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1□□□□□ -2.57
LRRC39Q96DD0 AC037487.3-201ENST00000606668 112 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 AP001362.1-201ENST00000625165 124 ntBASIC-1□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 FGF7P6-202ENST00000451282 293 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 RNU6-976P-201ENST00000516086 111 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 AC090574.1-201ENST00000623186 233 ntBASIC-1.01□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 RNU6-728P-201ENST00000365375 104 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 MIR652-201ENST00000385278 98 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 SNORA79-201ENST00000408376 140 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 AC244090.1-201ENST00000441884 93 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 RNA5SP236-201ENST00000516169 116 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 SNORD116-25-201ENST00000516517 92 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 AC007012.1-201ENST00000567192 175 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 MIR1302-1-201ENST00000637932 143 ntBASIC-1.02□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 SNORD114-15-201ENST00000364687 72 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 SNORA63.7-201ENST00000365579 123 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 RNU6-571P-201ENST00000384128 107 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Z83846.1-201ENST00000446798 265 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 SNORD2.1-201ENST00000458762 69 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 SNORD19B-201ENST00000459623 84 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 RNU6-287P-201ENST00000516230 98 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 MIR376B-201ENST00000614515 100 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 AC073869.6-201ENST00000640656 341 ntBASIC-1.03□□□□□ -2.57
LRRC39Q96DD0 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 RNU6-623P-201ENST00000363143 105 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 RNU6-876P-201ENST00000391295 104 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 RNU6-651P-201ENST00000411040 105 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 RNU4-63P-201ENST00000411313 118 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 SNORA13-201ENST00000458790 133 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 SERF1AP1-201ENST00000514575 187 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 AC093783.1-201ENST00000612976 329 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.04□□□□□ -2.58
LRRC39Q96DD0 MTND5P18-201ENST00000445624 1801 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 RNU6-502P-201ENST00000362419 108 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 RNU6-450P-201ENST00000364654 107 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 RNU6-472P-201ENST00000384299 107 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 MIR196A1-201ENST00000388006 70 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 RNU2-4P-201ENST00000606190 192 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 AL132765.2-201ENST00000610812 351 ntBASIC-1.05□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNU6-806P-201ENST00000365147 105 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNU6-690P-201ENST00000365242 106 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNY4P3-201ENST00000365254 95 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 SNORD116-4-201ENST00000384733 96 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR516A2-201ENST00000384888 90 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR516A1-201ENST00000385033 90 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNU6-823P-201ENST00000391042 103 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNU4-69P-201ENST00000410677 143 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 RNU6-850P-201ENST00000516934 103 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR3179-1-201ENST00000578940 84 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR3179-2-201ENST00000579107 84 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR3179-3-201ENST00000579566 84 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 AC009779.6-201ENST00000603972 165 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 MIR3179-4-201ENST00000617599 84 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 AC087741.2-201ENST00000619415 172 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 U6.100-201ENST00000636230 99 ntBASIC-1.06□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.07□□□□□ -2.58
LRRC39Q96DD0 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.07□□□□□ -2.58
LRRC39Q96DD0 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
LRRC39Q96DD0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.07□□□□□ -2.58
LRRC39Q96DD0 RNU7-2P-201ENST00000516096 62 ntBASIC-1.07□□□□□ -2.58
LRRC39Q96DD0 MIR5704-201ENST00000584029 77 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms