Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC138869.1-201ENST00000568623 124 ntBASIC0.05□□□□□ -2.4
RPUSD4Q96CM3 MIR548H5-201ENST00000580314 60 ntBASIC0.05□□□□□ -2.4
RPUSD4Q96CM3 RNU7-10P-201ENST00000607194 63 ntBASIC0.05□□□□□ -2.4
RPUSD4Q96CM3 MIR101-2-201ENST00000362195 79 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU6-187P-201ENST00000384139 106 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 MIR518E-201ENST00000385252 88 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU6-588P-201ENST00000410281 105 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU7-164P-201ENST00000459221 62 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU7-120P-201ENST00000459334 63 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU7-123P-201ENST00000515911 60 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 MIR4743-201ENST00000584576 69 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 RNU1-29P-201ENST00000606574 126 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 AC022709.1-201ENST00000615967 87 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 AL162376.1-201ENST00000624117 175 ntBASIC0.04□□□□□ -2.4
RPUSD4Q96CM3 SNORA63.5-201ENST00000363548 123 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 RNU6-726P-201ENST00000364680 107 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 Y_RNA.297-201ENST00000364950 91 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 Y_RNA.584-201ENST00000391090 114 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 AC099654.10-201ENST00000640395 161 ntBASIC0.03□□□□□ -2.4
RPUSD4Q96CM3 RNA5SP403-201ENST00000363598 108 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORD18B-201ENST00000365659 72 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 RNU6-449P-201ENST00000383914 107 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 RNU6-574P-201ENST00000384265 107 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 MIR598-201ENST00000384868 97 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 MIR519A1-201ENST00000385257 85 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 PCNPP3-201ENST00000393579 471 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORA62.5-201ENST00000516634 120 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 AC022559.1-201ENST00000520905 205 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 RNA5SP128-201ENST00000365305 116 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 AP002392.1-201ENST00000537692 208 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 AC141557.1-201ENST00000540982 400 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 MIR4514-201ENST00000581410 57 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
RPUSD4Q96CM3 SNORD115-24-201ENST00000363528 82 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 RNY1P11-201ENST00000363759 113 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 RNU6-200P-201ENST00000364743 107 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.423-201ENST00000384057 113 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 MIR206-201ENST00000384872 86 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 RNU6-1321P-201ENST00000390905 107 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 SNORD77B-201ENST00000391112 67 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 MIR548I2-201ENST00000408348 149 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 RNU7-161P-201ENST00000517289 62 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0□□□□□ -2.41
RPUSD4Q96CM3 MIR4752-201ENST00000579672 72 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 AC105081.1-201ENST00000617727 106 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 MIR3658-201ENST00000636291 56 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 AC010487.4-201ENST00000637027 61 ntBASIC0□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU4-67P-201ENST00000364569 141 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU6-309P-201ENST00000364573 106 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU6-756P-201ENST00000383997 107 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU6-127P-201ENST00000390897 107 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 AC097635.1-201ENST00000450678 155 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU7-197P-201ENST00000458836 62 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU7-48P-201ENST00000458875 63 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 AP001362.1-201ENST00000625165 124 ntBASIC-0.01□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 RNU6-161P-201ENST00000363051 106 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 RNU6-379P-201ENST00000363813 104 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 RNU6-682P-201ENST00000363843 106 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORD37.2-201ENST00000391075 66 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 AC108059.2-201ENST00000434626 151 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORA81.3-201ENST00000517283 198 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 AL137067.1-201ENST00000615933 120 ntBASIC-0.02□□□□□ -2.41
RPUSD4Q96CM3 SNORD114-26-201ENST00000363543 72 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 MIR635-201ENST00000384830 98 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 MIR643-201ENST00000385267 97 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 MIR892B-201ENST00000401279 77 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 snoU13.18-201ENST00000459483 104 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 RNU7-2P-201ENST00000516096 62 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 AC073869.9-201ENST00000641610 120 ntBASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
RPUSD4Q96CM3 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms