Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RNU6-977P-201ENST00000516411 103 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 Y_RNA.709-201ENST00000516952 92 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 MIR5009-201ENST00000578736 100 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 AL035470.1-201ENST00000622571 220 ntBASIC1.08□□□□□ -2.24
CTHRC1Q96CG8 RNU6-403P-201ENST00000363163 104 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6-1107P-201ENST00000364817 104 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 SNORD114-24-201ENST00000365029 72 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6-42P-201ENST00000384165 107 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 Y_RNA.448-201ENST00000384185 108 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 MIR125B2-201ENST00000385128 89 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6-1321P-201ENST00000390905 107 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 MIR1276-201ENST00000408707 83 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU7-48P-201ENST00000458875 63 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6-589P-201ENST00000516485 107 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 RNU6-919P-201ENST00000516731 104 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 AL512310.12-203ENST00000640543 90 ntBASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CTHRC1Q96CG8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 U8.6-201ENST00000364939 135 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 RNU6-215P-201ENST00000365169 102 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 Y_RNA.328-201ENST00000365208 113 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 RNU4-83P-201ENST00000410863 133 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 U7.7-201ENST00000459276 60 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 RNU6-1018P-201ENST00000516577 106 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 MIR4676-201ENST00000583078 72 ntBASIC1.06□□□□□ -2.24
CTHRC1Q96CG8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 RNY1P2-201ENST00000364820 117 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 RNU6-364P-201ENST00000384387 107 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 MIR938-201ENST00000401216 83 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 RNA5SP220-201ENST00000516298 104 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 DEFB131E-201ENST00000532329 154 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 MIR4491-201ENST00000581087 68 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 AC020891.4-201ENST00000605745 93 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 MIR6734-201ENST00000621166 68 ntBASIC1.05□□□□□ -2.24
CTHRC1Q96CG8 RNU6-1014P-201ENST00000383940 103 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 SNORD89-201ENST00000390981 114 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 MIR1302-5-201ENST00000408164 150 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 AC015818.7-201ENST00000428754 109 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 AC087499.7-201ENST00000441958 109 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 AP001362.1-201ENST00000625165 124 ntBASIC1.04□□□□□ -2.24
CTHRC1Q96CG8 RNA5SP133-201ENST00000363368 119 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 Y_RNA.323-201ENST00000365157 109 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 SNORD38.2-201ENST00000384470 69 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 SNORA72.6-201ENST00000384520 129 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 MIR7-2-201ENST00000384970 110 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 AL035461.1-201ENST00000421490 332 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 AC025627.3-201ENST00000582078 182 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 U6.109-201ENST00000636749 87 ntBASIC1.03□□□□□ -2.24
CTHRC1Q96CG8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
CTHRC1Q96CG8 RNU4-58P-201ENST00000363192 141 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 MIR520F-201ENST00000384824 87 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 RNY4P18-201ENST00000391107 89 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 RNU1-119P-201ENST00000391122 165 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 MIR4804-201ENST00000581683 73 ntBASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.119-201ENST00000363301 96 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 MIR605-201ENST00000385078 83 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 RNU6-679P-201ENST00000391003 106 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.588-201ENST00000391254 102 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 AC096949.1-201ENST00000412047 152 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 RNU7-56P-201ENST00000458744 62 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 SNORD92-201ENST00000585078 85 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 AC096720.1-201ENST00000604441 183 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 MIR376B-201ENST00000614515 100 ntBASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CTHRC1Q96CG8 RNU6-1313P-201ENST00000362622 102 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.360-201ENST00000365512 102 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 RNU6-1113P-201ENST00000384348 107 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 MIR1285-1-201ENST00000408593 84 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 MIR4694-201ENST00000578534 80 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 MIR6082-201ENST00000613604 109 ntBASIC1□□□□□ -2.25
CTHRC1Q96CG8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.13-201ENST00000362403 112 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 RNU6-369P-201ENST00000362515 102 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 RNU4-36P-201ENST00000364294 144 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 AC004941.2-201ENST00000427009 228 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 RNU7-102P-201ENST00000458948 62 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 RNU6-765P-201ENST00000516916 99 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 MIR4500-201ENST00000579472 76 ntBASIC0.99□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.10-201ENST00000362371 110 ntBASIC0.98□□□□□ -2.25
CTHRC1Q96CG8 Y_RNA.163-201ENST00000363702 113 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms