Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MIR1-1-201ENST00000362147 71 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 RNU6-1014P-201ENST00000383940 103 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 MIR942-201ENST00000401111 86 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 RNA5SP237-201ENST00000410414 113 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 MIR3163-201ENST00000581592 73 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 AC105081.1-201ENST00000617727 106 ntBASIC1.55□□□□□ -2.16
ZNF428Q96B54 RNU6-1298P-201ENST00000362456 101 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 Y_RNA.68-201ENST00000362881 102 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 RNY4P6-201ENST00000363667 96 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 Y_RNA.247-201ENST00000364500 92 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 RNU6-679P-201ENST00000391003 106 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 MIR1827-201ENST00000408549 66 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 RNA5SP89-201ENST00000410300 108 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 RNU4-69P-201ENST00000410677 143 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 AC096949.1-201ENST00000412047 152 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 AC068339.1-201ENST00000526965 141 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 AC023827.1-201ENST00000569247 97 ntBASIC1.54□□□□□ -2.16
ZNF428Q96B54 SNORD115-19-201ENST00000363098 82 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 SNORD115-18-201ENST00000363293 82 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 Y_RNA.163-201ENST00000363702 113 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 SNORD115-17-201ENST00000364612 82 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 MIR590-201ENST00000385008 97 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 RNU6-816P-201ENST00000390914 107 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 RNU6-1268P-201ENST00000391214 107 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 RNU6-1239P-201ENST00000391310 107 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 SNORD67.1-201ENST00000516618 108 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 RNU6-537P-201ENST00000517277 103 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 MIR6767-201ENST00000637302 66 ntBASIC1.53□□□□□ -2.16
ZNF428Q96B54 RNU6-934P-201ENST00000365154 107 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 SNORA7.5-201ENST00000410672 110 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 RPS26P5-201ENST00000418544 335 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 RPS29P28-201ENST00000446439 141 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 RNU7-35P-201ENST00000517174 62 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 MIR4679-2-201ENST00000578358 77 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 MIR5009-201ENST00000578736 100 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 AC091304.10-201ENST00000641554 121 ntBASIC1.52□□□□□ -2.17
ZNF428Q96B54 RNY1P13-201ENST00000365030 105 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 Y_RNA.323-201ENST00000365157 109 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 Y_RNA.328-201ENST00000365208 113 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 RNA5SP255-201ENST00000516370 107 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 AL662814.1-201ENST00000617364 121 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 AL162726.3-218ENST00000636401 95 ntBASIC1.51□□□□□ -2.17
ZNF428Q96B54 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.51□□□□□ -2.17
ZNF428Q96B54 MIR520E-201ENST00000384867 87 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 MIR206-201ENST00000384872 86 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 MIR577-201ENST00000385196 96 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 RPS29P1-201ENST00000465274 159 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF428Q96B54 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.5□□□□□ -2.17
ZNF428Q96B54 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
ZNF428Q96B54 RNU4-67P-201ENST00000364569 141 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 RNU6-1321P-201ENST00000390905 107 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 RNU7-79P-201ENST00000516082 62 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 RNU6-521P-201ENST00000516663 105 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 RNU7-137P-201ENST00000516788 62 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 AC141557.1-201ENST00000540982 400 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 AC141846.1-201ENST00000568348 142 ntBASIC1.49□□□□□ -2.17
ZNF428Q96B54 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.49□□□□□ -2.17
ZNF428Q96B54 MIR30D-201ENST00000362283 70 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 RNU6-640P-201ENST00000363693 105 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 RNU6-905P-201ENST00000384434 107 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 MIR34C-201ENST00000384831 77 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 SNORD89-201ENST00000390981 114 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 RPL39P25-201ENST00000449384 154 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 RNU6-412P-201ENST00000516434 106 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 RNU6-94P-201ENST00000607728 107 ntBASIC1.48□□□□□ -2.17
ZNF428Q96B54 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ZNF428Q96B54 Y_RNA.348-201ENST00000365403 103 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 Y_RNA.360-201ENST00000365512 102 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 RNU6-756P-201ENST00000383997 107 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 SNORD124-201ENST00000459577 104 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 RNU6-168P-201ENST00000516189 101 ntBASIC1.47□□□□□ -2.17
ZNF428Q96B54 RNU6-363P-201ENST00000362895 105 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 RNU1-36P-201ENST00000365130 165 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 MIR488-201ENST00000365739 83 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 SNORA51.5-201ENST00000384126 131 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 Y_RNA.495-201ENST00000384435 112 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 RNY1P4-201ENST00000384595 115 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 AL031737.1-201ENST00000450125 223 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 RNU6-795P-201ENST00000516323 103 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 RNU6-1223P-201ENST00000517124 104 ntBASIC1.46□□□□□ -2.18
ZNF428Q96B54 Y_RNA.433-201ENST00000384089 102 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 Y_RNA.448-201ENST00000384185 108 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 MIR100-201ENST00000385259 80 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 U8.15-201ENST00000390947 134 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 MIR1257-201ENST00000408490 117 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.45□□□□□ -2.18
ZNF428Q96B54 RNU6-1006P-201ENST00000516998 103 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 MIR376B-201ENST00000614515 100 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 AC012531.4-201ENST00000616509 177 ntBASIC1.45□□□□□ -2.18
ZNF428Q96B54 RNU6-1099P-201ENST00000363533 107 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 Y_RNA.155-201ENST00000363632 101 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 RNU1-93P-201ENST00000364704 169 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 SNORD83.1-201ENST00000411362 77 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 RNU6-904P-201ENST00000516206 101 ntBASIC1.44□□□□□ -2.18
ZNF428Q96B54 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms