Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MIR548H5-201ENST00000580314 60 ntBASIC2.54□□□□□ -2
HLA-CQ95604 MIR4713-201ENST00000582691 75 ntBASIC2.54□□□□□ -2
HLA-CQ95604 AL773524.1-201ENST00000614065 229 ntBASIC2.54□□□□□ -2
HLA-CQ95604 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-CQ95604 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HLA-CQ95604 MIR103A2-201ENST00000362154 78 ntBASIC2.53□□□□□ -2
HLA-CQ95604 RNU6-132P-201ENST00000383863 107 ntBASIC2.53□□□□□ -2
HLA-CQ95604 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
HLA-CQ95604 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
HLA-CQ95604 MIR1185-1-201ENST00000408598 86 ntBASIC2.53□□□□□ -2
HLA-CQ95604 SNORD93-201ENST00000408813 74 ntBASIC2.53□□□□□ -2
HLA-CQ95604 RNU6-303P-201ENST00000517091 106 ntBASIC2.53□□□□□ -2
HLA-CQ95604 MIR3134-201ENST00000579433 74 ntBASIC2.53□□□□□ -2
HLA-CQ95604 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.53□□□□□ -2
HLA-CQ95604 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-CQ95604 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HLA-CQ95604 RNU6-208P-201ENST00000362431 107 ntBASIC2.52□□□□□ -2.01
HLA-CQ95604 SNORD33-201ENST00000362761 85 ntBASIC2.52□□□□□ -2.01
HLA-CQ95604 MIR635-201ENST00000384830 98 ntBASIC2.52□□□□□ -2.01
HLA-CQ95604 SNORD88.1-201ENST00000408684 91 ntBASIC2.52□□□□□ -2.01
HLA-CQ95604 AC015818.7-201ENST00000428754 109 ntBASIC2.52□□□□□ -2.01
HLA-CQ95604 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-CQ95604 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HLA-CQ95604 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-CQ95604 RNU1-36P-201ENST00000365130 165 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 RNU6-439P-201ENST00000384188 106 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 SNORA64-201ENST00000384674 134 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 RNU7-106P-201ENST00000459514 67 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 RNU6-295P-201ENST00000516901 104 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
HLA-CQ95604 RNA5SP456-201ENST00000364002 114 ntBASIC2.5□□□□□ -2.01
HLA-CQ95604 SNORA26.9-201ENST00000391322 122 ntBASIC2.5□□□□□ -2.01
HLA-CQ95604 SNORD100-201ENST00000408573 76 ntBASIC2.5□□□□□ -2.01
HLA-CQ95604 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
HLA-CQ95604 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-CQ95604 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-CQ95604 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-CQ95604 MIR101-2-201ENST00000362195 79 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 RNU5F-1-201ENST00000362507 117 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 AC074348.1-201ENST00000426503 132 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 SNORA25.16-201ENST00000516741 121 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 RNU6-765P-201ENST00000516916 99 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 RNU6-448P-201ENST00000517052 107 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-CQ95604 uc_338.6-201ENST00000613544 171 ntBASIC2.49□□□□□ -2.01
HLA-CQ95604 RNA5SP276-201ENST00000362580 94 ntBASIC2.48□□□□□ -2.01
HLA-CQ95604 Y_RNA.56-201ENST00000362798 112 ntBASIC2.48□□□□□ -2.01
HLA-CQ95604 RNU6-1260P-201ENST00000362944 107 ntBASIC2.48□□□□□ -2.01
HLA-CQ95604 RNU6-947P-201ENST00000516264 106 ntBASIC2.48□□□□□ -2.01
HLA-CQ95604 MIR219B-201ENST00000637023 88 ntBASIC2.48□□□□□ -2.01
HLA-CQ95604 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-CQ95604 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
HLA-CQ95604 RNU6-957P-201ENST00000363652 99 ntBASIC2.47□□□□□ -2.01
HLA-CQ95604 RNY4P3-201ENST00000365254 95 ntBASIC2.47□□□□□ -2.01
HLA-CQ95604 Y_RNA.532-201ENST00000384590 113 ntBASIC2.47□□□□□ -2.01
HLA-CQ95604 Y_RNA.536-201ENST00000384621 113 ntBASIC2.47□□□□□ -2.01
HLA-CQ95604 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-CQ95604 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-CQ95604 RNU1-17P-201ENST00000363022 152 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 Y_RNA.355-201ENST00000365462 98 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 RNU6-634P-201ENST00000459134 106 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 RNU6-1015P-201ENST00000517121 99 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 YWHAEP2-201ENST00000580066 112 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 YWHAEP3-201ENST00000582767 121 ntBASIC2.46□□□□□ -2.02
HLA-CQ95604 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.46□□□□□ -2.02
HLA-CQ95604 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
HLA-CQ95604 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-CQ95604 RPS27P16-201ENST00000425758 201 ntBASIC2.45□□□□□ -2.02
HLA-CQ95604 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-CQ95604 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.45□□□□□ -2.02
HLA-CQ95604 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HLA-CQ95604 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-CQ95604 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HLA-CQ95604 MIRLET7F1-201ENST00000362202 87 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 MIR302D-201ENST00000362275 68 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 RNU6-403P-201ENST00000363163 104 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 MIR1257-201ENST00000408490 117 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 RNU6-70P-201ENST00000516438 60 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 SNORA44.1-201ENST00000517031 108 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 MIR6082-201ENST00000613604 109 ntBASIC2.44□□□□□ -2.02
HLA-CQ95604 MIR337-201ENST00000362281 93 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 RNU6-654P-201ENST00000364373 107 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 Y_RNA.239-201ENST00000364444 113 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 RNU6-1065P-201ENST00000384513 106 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 AC097635.1-201ENST00000450678 155 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 snoU13.9-201ENST00000458927 103 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 RNU7-185P-201ENST00000459215 60 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 TRAJ51-201ENST00000504127 63 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 Y_RNA.809-201ENST00000516058 95 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
HLA-CQ95604 RNU6-687P-201ENST00000516443 89 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms