Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 RNY1P6-201ENST00000384193 109 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 MIR604-201ENST00000384880 94 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 MIR548L-201ENST00000408303 86 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 AC093423.1-201ENST00000440817 142 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 MIR548AE2-201ENST00000583456 67 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 AC145423.2-201ENST00000610631 239 ntBASIC-0.38□□□□□ -2.47
LMX1AQ8TE12 RNU6-103P-201ENST00000363686 107 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 RNA5SP368-201ENST00000364298 116 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 MIR539-201ENST00000365690 78 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 MIR599-201ENST00000385069 95 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 SNORA49-201ENST00000386157 136 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 MT-TD-201ENST00000387419 68 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 AL022718.1-201ENST00000412004 84 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 AC114755.3-201ENST00000481111 251 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 RNU2-35P-201ENST00000516446 142 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 RNU6-988P-201ENST00000519081 107 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 AC084368.1-201ENST00000620935 65 ntBASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.39□□□□□ -2.47
LMX1AQ8TE12 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 RNU4-70P-201ENST00000384579 139 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 SNORD56B-201ENST00000384713 71 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 MIR9-2-201ENST00000384838 87 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 MIR519E-201ENST00000385075 84 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 RNU7-195P-201ENST00000458793 62 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 RNU7-113P-201ENST00000459273 62 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 RNU7-106P-201ENST00000459514 67 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 RNU7-10P-201ENST00000607194 63 ntBASIC-0.4□□□□□ -2.47
LMX1AQ8TE12 MTND4P29-201ENST00000503122 1372 ntBASIC-0.41□□□□□ -2.47
LMX1AQ8TE12 MIR335-201ENST00000362173 94 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 MIR101-1-201ENST00000362265 75 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 RNU1-141P-201ENST00000364623 158 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 AC113618.1-201ENST00000416747 285 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 snoU13.19-201ENST00000459148 104 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 RNA5SP33-201ENST00000516687 98 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 AL442663.2-201ENST00000554385 511 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 MTND5P40-201ENST00000559945 246 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 AL391099.1-201ENST00000624635 187 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 AL162726.3-218ENST00000636401 95 ntBASIC-0.41□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNU6-509P-201ENST00000363519 107 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNY4P3-201ENST00000365254 95 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNU4-17P-201ENST00000365598 141 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNY3P14-201ENST00000384309 102 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 MIR519A1-201ENST00000385257 85 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RPS29P8-201ENST00000445109 171 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNA5SP236-201ENST00000516169 116 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 MIR4744-201ENST00000581563 82 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 U2.14-201ENST00000615943 113 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 MIR548AZ-201ENST00000616567 95 ntBASIC-0.42□□□□□ -2.48
LMX1AQ8TE12 RNU6-508P-201ENST00000363231 103 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 RNY1P11-201ENST00000363759 113 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 MIR635-201ENST00000384830 98 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 AL603914.1-201ENST00000401964 204 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 MTND4LP11-201ENST00000422184 280 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 AC097635.1-201ENST00000450678 155 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 AC097510.1-201ENST00000510945 133 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 MIR4680-201ENST00000580906 66 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 AC108676.2-201ENST00000605225 163 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 RNU6-86P-201ENST00000606534 107 ntBASIC-0.43□□□□□ -2.48
LMX1AQ8TE12 RNU6-524P-201ENST00000384270 107 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 MIR206-201ENST00000384872 86 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 SNORD63B-201ENST00000411005 70 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 AL161932.1-201ENST00000437408 146 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 AL121914.1-201ENST00000450188 156 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 MIR4500-201ENST00000579472 76 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 MIR548S-201ENST00000581352 82 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 FTX_2.1-201ENST00000618816 94 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 AC134503.1-201ENST00000633048 54 ntBASIC-0.44□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 SNORD114-15-201ENST00000364687 72 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 RNU6-571P-201ENST00000384128 107 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 RNU6-455P-201ENST00000384681 107 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 MIR181B2-201ENST00000385004 89 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 RNU6-578P-201ENST00000390980 103 ntBASIC-0.45□□□□□ -2.48
LMX1AQ8TE12 MIR548I2-201ENST00000408348 149 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms