Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNU6-1104P-201ENST00000384723 104 ntBASIC0.25□□□□□ -2.37
CCDC63Q8NA47 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.25□□□□□ -2.37
CCDC63Q8NA47 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
CCDC63Q8NA47 RNY1P2-201ENST00000364820 117 ntBASIC0.24□□□□□ -2.37
CCDC63Q8NA47 Y_RNA.299-201ENST00000364973 94 ntBASIC0.24□□□□□ -2.37
CCDC63Q8NA47 RNU6-1321P-201ENST00000390905 107 ntBASIC0.24□□□□□ -2.37
CCDC63Q8NA47 RNY4P20-201ENST00000516678 93 ntBASIC0.24□□□□□ -2.37
CCDC63Q8NA47 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
CCDC63Q8NA47 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.24□□□□□ -2.37
CCDC63Q8NA47 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 RNU6-1229P-201ENST00000364295 107 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 MIR206-201ENST00000384872 86 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 MIRLET7F2-201ENST00000385277 83 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 Y_RNA.580-201ENST00000391004 95 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 RNU6-1307P-201ENST00000391012 103 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 RNU6-460P-201ENST00000391158 108 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 RNU2-59P-201ENST00000410482 191 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 RNU6-394P-201ENST00000410735 107 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 AL137067.1-201ENST00000615933 120 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 Y_RNA.778-201ENST00000620203 90 ntBASIC0.23□□□□□ -2.37
CCDC63Q8NA47 Y_RNA.56-201ENST00000362798 112 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 RNU6-151P-201ENST00000364158 107 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC63Q8NA47 TUG1_4.1-201ENST00000619464 181 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 MIR6755-201ENST00000619993 66 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 MIR6734-201ENST00000621166 68 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 AC091304.10-201ENST00000641554 121 ntBASIC0.22□□□□□ -2.37
CCDC63Q8NA47 MIR101-2-201ENST00000362195 79 ntBASIC0.21□□□□□ -2.38
CCDC63Q8NA47 RNU6-449P-201ENST00000383914 107 ntBASIC0.21□□□□□ -2.38
CCDC63Q8NA47 IGKV1-22-201ENST00000524313 326 ntBASIC0.21□□□□□ -2.38
CCDC63Q8NA47 MIR4711-201ENST00000578274 70 ntBASIC0.21□□□□□ -2.38
CCDC63Q8NA47 MIR3121-201ENST00000579680 77 ntBASIC0.21□□□□□ -2.38
CCDC63Q8NA47 Y_RNA.448-201ENST00000384185 108 ntBASIC0.2□□□□□ -2.38
CCDC63Q8NA47 RNU6-429P-201ENST00000384582 108 ntBASIC0.2□□□□□ -2.38
CCDC63Q8NA47 PCNPP3-201ENST00000393579 471 ntBASIC0.2□□□□□ -2.38
CCDC63Q8NA47 AC244505.6-201ENST00000452829 130 ntBASIC0.2□□□□□ -2.38
CCDC63Q8NA47 RNU5E-3P-201ENST00000515913 68 ntBASIC0.2□□□□□ -2.38
CCDC63Q8NA47 RNU6-915P-201ENST00000364943 103 ntBASIC0.19□□□□□ -2.38
CCDC63Q8NA47 SNORD116-18-201ENST00000383961 92 ntBASIC0.19□□□□□ -2.38
CCDC63Q8NA47 RNU6-1126P-201ENST00000384002 107 ntBASIC0.19□□□□□ -2.38
CCDC63Q8NA47 RNU6-187P-201ENST00000384139 106 ntBASIC0.19□□□□□ -2.38
CCDC63Q8NA47 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
CCDC63Q8NA47 RNU6-804P-201ENST00000384286 107 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 RNU6-616P-201ENST00000384353 107 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 MT-TI-201ENST00000387365 69 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 SNORD77B-201ENST00000391112 67 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 AC108059.2-201ENST00000434626 151 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 RNU7-48P-201ENST00000458875 63 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CCDC63Q8NA47 Y_RNA.49-201ENST00000362714 112 ntBASIC0.17□□□□□ -2.38
CCDC63Q8NA47 SNORD115-24-201ENST00000363528 82 ntBASIC0.17□□□□□ -2.38
CCDC63Q8NA47 RNU6-42P-201ENST00000384165 107 ntBASIC0.17□□□□□ -2.38
CCDC63Q8NA47 RNU7-2P-201ENST00000516096 62 ntBASIC0.17□□□□□ -2.38
CCDC63Q8NA47 FTX_2.1-201ENST00000618816 94 ntBASIC0.17□□□□□ -2.38
CCDC63Q8NA47 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CCDC63Q8NA47 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 RNU6-182P-201ENST00000516970 105 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 RNU7-161P-201ENST00000517289 62 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 MIR3144-201ENST00000579460 79 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 MIR548H5-201ENST00000580314 60 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
CCDC63Q8NA47 Y_RNA.98-201ENST00000363109 102 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.127-201ENST00000363386 109 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.280-201ENST00000364765 112 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.398-201ENST00000383952 99 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.423-201ENST00000384057 113 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.692-201ENST00000516627 105 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 MIR4500-201ENST00000579472 76 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 AC087741.2-201ENST00000619415 172 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 MIR4315-1-201ENST00000636800 73 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 MIR4315-2-201ENST00000640925 73 ntBASIC0.15□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.114-201ENST00000363265 113 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.150-201ENST00000363562 102 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 RNU6-726P-201ENST00000364680 107 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 SNORD115-35-201ENST00000365122 82 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.328-201ENST00000365208 113 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 RNU6-716P-201ENST00000365621 103 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 MIR513C-201ENST00000401352 84 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 TRAJ51-201ENST00000504127 63 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 MIR4752-201ENST00000579672 72 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 MIR548X2-201ENST00000579776 100 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 MIR376B-201ENST00000614515 100 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 AP001340.1-201ENST00000624405 217 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 AP001362.1-201ENST00000625165 124 ntBASIC0.14□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.8-201ENST00000362353 102 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 RNA5SP403-201ENST00000363598 108 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.294-201ENST00000364916 102 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 RNU6-886P-201ENST00000384319 105 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 BX276092.1-201ENST00000427368 251 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.676-201ENST00000516393 96 ntBASIC0.13□□□□□ -2.39
CCDC63Q8NA47 Y_RNA.420-201ENST00000384043 110 ntBASIC0.12□□□□□ -2.39
CCDC63Q8NA47 MIR569-201ENST00000385228 96 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms