Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR548AD-201ENST00000584780 82 ntBASIC-0.2□□□□□ -2.44
CDKL3Q8IVW4 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
CDKL3Q8IVW4 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNU6-690P-201ENST00000365242 106 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNU2-38P-201ENST00000410856 79 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNU7-165P-201ENST00000458864 60 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNA5SP236-201ENST00000516169 116 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 MIR5706-201ENST00000579841 80 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 U7.6-201ENST00000610841 64 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 uc_338.28-201ENST00000612082 187 ntBASIC-0.21□□□□□ -2.44
CDKL3Q8IVW4 RNA5SP403-201ENST00000363598 108 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 RNU6-275P-201ENST00000364910 107 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 MIR214-201ENST00000385214 110 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 RNU6-269P-201ENST00000391077 97 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 MIR548H3-201ENST00000408771 118 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 MIR4308-201ENST00000580634 81 ntBASIC-0.22□□□□□ -2.44
CDKL3Q8IVW4 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNU6-429P-201ENST00000384582 108 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 MIR548F4-201ENST00000408515 105 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNA5SP163-201ENST00000410304 99 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNU2-35P-201ENST00000516446 142 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 MIR4677-201ENST00000584153 80 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 RNU7-10P-201ENST00000607194 63 ntBASIC-0.23□□□□□ -2.45
CDKL3Q8IVW4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 SNORD41.1-201ENST00000391000 69 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 HMGN2P22-201ENST00000427588 175 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 SNORD127-201ENST00000458892 86 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 AC104692.1-201ENST00000472406 90 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 U6.106-201ENST00000636360 105 ntBASIC-0.24□□□□□ -2.45
CDKL3Q8IVW4 SNORD27-201ENST00000363981 72 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 MTND2P23-201ENST00000422990 651 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 TRAJ51-201ENST00000504127 63 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 MIR6086-201ENST00000638065 55 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 AC073869.9-201ENST00000641610 120 ntBASIC-0.25□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 RNU6-768P-201ENST00000384683 107 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 MIR635-201ENST00000384830 98 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 MIR599-201ENST00000385069 95 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 RNU6-240P-201ENST00000516098 97 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 AC138907.4-201ENST00000570107 226 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 MIR4500-201ENST00000579472 76 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 AC011603.4-201ENST00000611325 277 ntBASIC-0.26□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 RNU6-449P-201ENST00000383914 107 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 MIR106A-201ENST00000384870 81 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 RNU7-164P-201ENST00000459221 62 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 AL117187.1-201ENST00000555482 181 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 AC021443.1-201ENST00000604478 211 ntBASIC-0.27□□□□□ -2.45
CDKL3Q8IVW4 RNU6-508P-201ENST00000363231 103 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 RNU6-865P-201ENST00000364772 107 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 RNU6-818P-201ENST00000364837 108 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 RNU4-69P-201ENST00000410677 143 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 MTATP6P21-201ENST00000440681 189 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 AL670379.3-201ENST00000605040 251 ntBASIC-0.28□□□□□ -2.45
CDKL3Q8IVW4 RNY1P11-201ENST00000363759 113 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 MIR206-201ENST00000384872 86 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 SNORA75.1-201ENST00000391130 148 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 AC006210.1-201ENST00000424882 111 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 AC097635.1-201ENST00000450678 155 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 RNU7-48P-201ENST00000458875 63 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 MIR4645-201ENST00000583158 77 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 AC008737.2-201ENST00000599446 118 ntBASIC-0.29□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 MIR606-201ENST00000384851 96 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 SNORD58.1-201ENST00000391313 66 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 SNORD110-201ENST00000408189 75 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 BX276092.1-201ENST00000427368 251 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 RNA5SP484-201ENST00000458857 111 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 HAR1A.1-201ENST00000459583 118 ntBASIC-0.3□□□□□ -2.46
CDKL3Q8IVW4 RNU7-123P-201ENST00000515911 60 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms