Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-275P-201ENST00000364910 107 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 MIR7-2-201ENST00000384970 110 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 MIR4500-201ENST00000579472 76 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
NUDCD3Q8IVD9 SNORD114-12-201ENST00000365400 75 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 SNORD110-201ENST00000408189 75 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 RNU2-38P-201ENST00000410856 79 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 AC006210.1-201ENST00000424882 111 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 SNORD4A-201ENST00000459174 72 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 RNU6-240P-201ENST00000516098 97 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 NAMPTP3-201ENST00000569273 224 ntBASIC-0.4□□□□□ -2.47
NUDCD3Q8IVD9 SNORA18.1-201ENST00000363418 128 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 MIR214-201ENST00000385214 110 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 HMGN2P22-201ENST00000427588 175 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 AC097635.1-201ENST00000450678 155 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 AL670379.3-201ENST00000605040 251 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 AC011603.4-201ENST00000611325 277 ntBASIC-0.41□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 MIR106A-201ENST00000384870 81 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 MIR206-201ENST00000384872 86 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 RNU4-69P-201ENST00000410677 143 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 RNA5SP484-201ENST00000458857 111 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 AC138907.4-201ENST00000570107 226 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 AC021443.1-201ENST00000604478 211 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 U6.106-201ENST00000636360 105 ntBASIC-0.42□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-46P-201ENST00000383860 107 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-768P-201ENST00000384683 107 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 MIR548F4-201ENST00000408515 105 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 MIR548H3-201ENST00000408771 118 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 BX276092.1-201ENST00000427368 251 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 RNU7-164P-201ENST00000459221 62 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 CR383656.4-201ENST00000546909 122 ntBASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.43□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-797P-201ENST00000363101 109 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 MTND2P23-201ENST00000422990 651 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 AC084368.1-201ENST00000620935 65 ntBASIC-0.44□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 RNA5SP257-201ENST00000363023 116 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-865P-201ENST00000364772 107 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 SNORD127-201ENST00000458892 86 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.45□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 SNORD27-201ENST00000363981 72 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-818P-201ENST00000364837 108 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 MIR329-2-201ENST00000385029 84 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 MIR876-201ENST00000401147 81 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 SNORA25.13-201ENST00000516395 103 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 MIR3920-201ENST00000581751 86 ntBASIC-0.46□□□□□ -2.48
NUDCD3Q8IVD9 MIR548I2-201ENST00000408348 149 ntBASIC-0.47□□□□□ -2.48
NUDCD3Q8IVD9 MTATP6P21-201ENST00000440681 189 ntBASIC-0.47□□□□□ -2.48
NUDCD3Q8IVD9 RNU7-195P-201ENST00000458793 62 ntBASIC-0.47□□□□□ -2.48
NUDCD3Q8IVD9 AP001362.1-201ENST00000625165 124 ntBASIC-0.47□□□□□ -2.48
NUDCD3Q8IVD9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.47□□□□□ -2.48
NUDCD3Q8IVD9 MIR148A-201ENST00000362215 68 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 MIR516B1-201ENST00000385211 90 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 SNORD63B-201ENST00000411005 70 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 RNU7-13P-201ENST00000516413 62 ntBASIC-0.48□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 MIR519A1-201ENST00000385257 85 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 SNORD77B-201ENST00000391112 67 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 IGLVI-20-201ENST00000519296 130 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 MIR3149-201ENST00000584629 83 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 AC009779.6-201ENST00000603972 165 ntBASIC-0.49□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 SNORD49B-201ENST00000365172 72 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.5□□□□□ -2.49
NUDCD3Q8IVD9 AC109327.2-201ENST00000448339 378 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms