Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MIR4452-201ENST00000583004 71 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 MIR6734-201ENST00000621166 68 ntBASIC0.81□□□□□ -2.28
RNF220Q5VTB9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RNF220Q5VTB9 AL157777.2-201ENST00000258070 137 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 RNY4P6-201ENST00000363667 96 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 SNORD115-35-201ENST00000365122 82 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 RNU7-48P-201ENST00000458875 63 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 RNU6-1234P-201ENST00000516877 103 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
RNF220Q5VTB9 MIR548D2-201ENST00000384955 97 ntBASIC0.79□□□□□ -2.28
RNF220Q5VTB9 RNU7-107P-201ENST00000459121 61 ntBASIC0.79□□□□□ -2.28
RNF220Q5VTB9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.79□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.78□□□□□ -2.28
RNF220Q5VTB9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.78□□□□□ -2.28
RNF220Q5VTB9 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
RNF220Q5VTB9 HSBP1P2-201ENST00000299671 229 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.71-201ENST00000362892 104 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.218-201ENST00000364218 104 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 RNU6-865P-201ENST00000364772 107 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 RNU6-429P-201ENST00000384582 108 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 MIR518E-201ENST00000385252 88 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 RNU6-735P-201ENST00000410612 107 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 SUMO1P3-201ENST00000439961 304 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 RNA5SP220-201ENST00000516298 104 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.773-201ENST00000607168 90 ntBASIC0.77□□□□□ -2.29
RNF220Q5VTB9 MIR101-2-201ENST00000362195 79 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.116-201ENST00000363292 103 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 SNORD114-22-201ENST00000365423 72 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
RNF220Q5VTB9 TMSB4XP3-201ENST00000445144 114 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.712-201ENST00000517011 92 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 MTND5P34-201ENST00000568888 325 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 AP001362.1-201ENST00000625165 124 ntBASIC0.76□□□□□ -2.29
RNF220Q5VTB9 RNU6-42P-201ENST00000384165 107 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 RNU6-291P-201ENST00000384720 107 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 RNU6-535P-201ENST00000384722 107 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
RNF220Q5VTB9 RNU6-469P-201ENST00000516253 101 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 RNU6-659P-201ENST00000516454 104 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 uc_338.16-201ENST00000621804 95 ntBASIC0.75□□□□□ -2.29
RNF220Q5VTB9 RNU6-1307P-201ENST00000391012 103 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 RNU6-521P-201ENST00000516663 105 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 MIR3678-201ENST00000578455 94 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 MIR4500-201ENST00000579472 76 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 AL590095.2-201ENST00000604136 117 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 MIR3914-2-201ENST00000637339 95 ntBASIC0.74□□□□□ -2.29
RNF220Q5VTB9 MIR96-201ENST00000362288 78 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 RNU6-81P-201ENST00000365608 104 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 SNORD116-14-201ENST00000383894 92 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 SNORD116-17-201ENST00000383929 92 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 SNORD116-15-201ENST00000384445 92 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 RNU6-959P-201ENST00000384671 107 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 SNORD116-19-201ENST00000384729 92 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 AL603908.1-201ENST00000406098 201 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 RPS29P1-201ENST00000465274 159 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 SNORA31.14-201ENST00000516728 116 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 RNU6-679P-201ENST00000391003 106 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 RNU6-135P-201ENST00000516769 101 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 MIR376B-201ENST00000614515 100 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.72□□□□□ -2.29
RNF220Q5VTB9 U6.95-201ENST00000636931 70 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 MIR6767-201ENST00000637302 66 ntBASIC0.72□□□□□ -2.29
RNF220Q5VTB9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.71□□□□□ -2.3
RNF220Q5VTB9 RNU6-363P-201ENST00000362895 105 ntBASIC0.71□□□□□ -2.3
RNF220Q5VTB9 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
RNF220Q5VTB9 AC018659.1-201ENST00000551083 169 ntBASIC0.71□□□□□ -2.3
RNF220Q5VTB9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
RNF220Q5VTB9 RNU4-67P-201ENST00000364569 141 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 MIR644A-201ENST00000385262 94 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 MIR548H5-201ENST00000580314 60 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 RNU7-10P-201ENST00000607194 63 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
RNF220Q5VTB9 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
RNF220Q5VTB9 Y_RNA.507-201ENST00000384500 99 ntBASIC0.69□□□□□ -2.3
RNF220Q5VTB9 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 276.2 ms