Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-919P-201ENST00000516731 104 ntBASIC1.39□□□□□ -2.19
SSRP1Q08945 RNU6-865P-201ENST00000364772 107 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 U8.6-201ENST00000364939 135 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 MIR489-201ENST00000384923 84 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 MIR100-201ENST00000385259 80 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 MIR1827-201ENST00000408549 66 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 SNORA7.5-201ENST00000410672 110 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 AC096949.1-201ENST00000412047 152 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 RNU7-48P-201ENST00000458875 63 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
SSRP1Q08945 RNU6-369P-201ENST00000362515 102 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 Y_RNA.323-201ENST00000365157 109 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 MIR125B2-201ENST00000385128 89 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 RNU6-733P-201ENST00000410759 104 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.37□□□□□ -2.19
SSRP1Q08945 SNORD124-201ENST00000459577 104 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 MIR5009-201ENST00000578736 100 ntBASIC1.37□□□□□ -2.19
SSRP1Q08945 Y_RNA.98-201ENST00000363109 102 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 SNORD114-24-201ENST00000365029 72 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 Y_RNA.328-201ENST00000365208 113 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 RNU6-53P-201ENST00000365367 106 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 RNU6-1307P-201ENST00000391012 103 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 MIR942-201ENST00000401111 86 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 RNU4-83P-201ENST00000410863 133 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 RNA5SP102-201ENST00000516865 106 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 AL136317.1-201ENST00000612653 226 ntBASIC1.36□□□□□ -2.19
SSRP1Q08945 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 RNY4P18-201ENST00000391107 89 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 RNU6-1018P-201ENST00000516577 106 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 MIR4491-201ENST00000581087 68 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 U6.109-201ENST00000636749 87 ntBASIC1.35□□□□□ -2.19
SSRP1Q08945 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.19
SSRP1Q08945 RNU6-403P-201ENST00000363163 104 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 RNA5SP133-201ENST00000363368 119 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 Y_RNA.191-201ENST00000363972 113 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SSRP1Q08945 RNU6-679P-201ENST00000391003 106 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 MIR938-201ENST00000401216 83 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 snoU13.18-201ENST00000459483 104 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 RNU6-1110P-201ENST00000516462 101 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 AC138749.4-201ENST00000563970 127 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 MIR4804-201ENST00000581683 73 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 AP001362.1-201ENST00000625165 124 ntBASIC1.34□□□□□ -2.19
SSRP1Q08945 RNU6-1014P-201ENST00000383940 103 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 AL035461.1-201ENST00000421490 332 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 AL353813.1-201ENST00000440700 253 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 U7.7-201ENST00000459276 60 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 MIR4452-201ENST00000583004 71 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 MIR376B-201ENST00000614515 100 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 AL512310.12-203ENST00000640543 90 ntBASIC1.33□□□□□ -2.2
SSRP1Q08945 RNU6-1313P-201ENST00000362622 102 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 Y_RNA.360-201ENST00000365512 102 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 RNU6-364P-201ENST00000384387 107 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 SNORA72.6-201ENST00000384520 129 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 MIR605-201ENST00000385078 83 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 SNORD89-201ENST00000390981 114 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 RNU7-156P-201ENST00000517214 74 ntBASIC1.32□□□□□ -2.2
SSRP1Q08945 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSRP1Q08945 SNORA22-201ENST00000383907 134 ntBASIC1.31□□□□□ -2.2
SSRP1Q08945 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
SSRP1Q08945 MIR34C-201ENST00000384831 77 ntBASIC1.31□□□□□ -2.2
SSRP1Q08945 SNORD92-201ENST00000585078 85 ntBASIC1.31□□□□□ -2.2
SSRP1Q08945 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SSRP1Q08945 MIR520F-201ENST00000384824 87 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 DEFB131E-201ENST00000532329 154 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 MIR4694-201ENST00000578534 80 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 MIR6082-201ENST00000613604 109 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 RMST_2.1-201ENST00000617263 136 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 MIR8066-201ENST00000617280 78 ntBASIC1.3□□□□□ -2.2
SSRP1Q08945 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SSRP1Q08945 Y_RNA.42-201ENST00000362660 108 ntBASIC1.29□□□□□ -2.2
SSRP1Q08945 RNU4-58P-201ENST00000363192 141 ntBASIC1.29□□□□□ -2.2
SSRP1Q08945 Y_RNA.119-201ENST00000363301 96 ntBASIC1.29□□□□□ -2.2
SSRP1Q08945 Y_RNA.163-201ENST00000363702 113 ntBASIC1.29□□□□□ -2.2
SSRP1Q08945 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
SSRP1Q08945 Y_RNA.13-201ENST00000362403 112 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 Y_RNA.377-201ENST00000365644 108 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNU6-1201P-201ENST00000384227 107 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 SNORD38.2-201ENST00000384470 69 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNU1-119P-201ENST00000391122 165 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 MIR1302-5-201ENST00000408164 150 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNU7-56P-201ENST00000458744 62 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 UBL5P1-201ENST00000507979 193 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNU6-1194P-201ENST00000516208 104 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNU6-765P-201ENST00000516916 99 ntBASIC1.28□□□□□ -2.2
SSRP1Q08945 RNY3P2-201ENST00000362918 102 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 RNU6-755P-201ENST00000364400 103 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 RNU6-106P-201ENST00000384405 107 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 MIR577-201ENST00000385196 96 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 PDCD5P2-201ENST00000507570 312 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
SSRP1Q08945 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms