Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Y_RNA.328-201ENST00000365208 113 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 RNY4P36-201ENST00000391116 96 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 AL161932.1-201ENST00000437408 146 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.772-201ENST00000606692 102 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 PISRT1.1-201ENST00000616930 107 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 AL359880.1-201ENST00000621879 266 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 AC091912.2-201ENST00000624798 167 ntBASIC-2.35□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.418-201ENST00000384029 102 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 RNU6-1307P-201ENST00000391012 103 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.622-201ENST00000411091 108 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 RNU6-120P-201ENST00000516077 103 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 RNU6-412P-201ENST00000516434 106 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 C8orf59P2-201ENST00000603441 271 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 AC107308.1-201ENST00000615897 301 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 AC087741.2-201ENST00000619415 172 ntBASIC-2.36□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 RNU4-10P-201ENST00000364383 140 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.424-201ENST00000384063 103 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 MRPS35P2-201ENST00000508242 191 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 RNU6-507P-201ENST00000516045 100 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.704-201ENST00000516851 102 ntBASIC-2.37□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.813-201ENST00000364639 102 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.286-201ENST00000364813 102 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 RNU6-472P-201ENST00000384299 107 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 PMCHL1-202ENST00000423102 261 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 MTND1P34-201ENST00000438556 671 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 AC006006.1-201ENST00000603082 144 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 MIR6874-201ENST00000635894 71 ntBASIC-2.38□□□□□ -2.79
HIST1H1AQ02539 RNU6-208P-201ENST00000362431 107 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.24-201ENST00000362508 103 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 RNU6-54P-201ENST00000365563 107 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 RNU6-937P-201ENST00000384325 106 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 AL445567.1-201ENST00000439121 144 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 AL445584.3-201ENST00000617173 78 ntBASIC-2.39□□□□□ -2.79
HIST1H1AQ02539 SNORA2.1-201ENST00000363089 137 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 RNU6-746P-201ENST00000384112 109 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 RNU6-780P-201ENST00000391030 104 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 RNU6-1254P-201ENST00000391266 104 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 AC082651.2-201ENST00000496833 166 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 RNU6-264P-201ENST00000517134 104 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 RNU2-4P-201ENST00000606190 192 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 MIR376B-201ENST00000614515 100 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 AC138305.3-201ENST00000624988 240 ntBASIC-2.4□□□□□ -2.79
HIST1H1AQ02539 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 RNA5SP86-201ENST00000390869 98 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 AL606845.1-201ENST00000404881 255 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 SEPT14P8-201ENST00000508026 178 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 RNU6-983P-201ENST00000516004 103 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 AC124864.2-201ENST00000624736 186 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 AC024614.3-201ENST00000637860 256 ntBASIC-2.41□□□□□ -2.8
HIST1H1AQ02539 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 MIR548H1-201ENST00000408610 102 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 RNU6-373P-201ENST00000411247 98 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 MTND1P1-201ENST00000445453 368 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 RNU7-2P-201ENST00000516096 62 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 RNU6-358P-201ENST00000516564 75 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 MIR4464-201ENST00000580818 92 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 AC009779.6-201ENST00000603972 165 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 SNORD113-5-201ENST00000607261 78 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 AL050303.3-201ENST00000613704 284 ntBASIC-2.42□□□□□ -2.8
HIST1H1AQ02539 SNORD27-201ENST00000363981 72 ntBASIC-2.43□□□□□ -2.8
HIST1H1AQ02539 RNU6-540P-201ENST00000384622 101 ntBASIC-2.43□□□□□ -2.8
HIST1H1AQ02539 MIR548F5-201ENST00000408421 86 ntBASIC-2.43□□□□□ -2.8
HIST1H1AQ02539 RNU6-584P-201ENST00000410350 95 ntBASIC-2.43□□□□□ -2.8
HIST1H1AQ02539 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-2.43□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.222-201ENST00000364264 102 ntBASIC-2.44□□□□□ -2.8
HIST1H1AQ02539 RNU6-243P-201ENST00000391140 107 ntBASIC-2.44□□□□□ -2.8
HIST1H1AQ02539 RNU4-69P-201ENST00000410677 143 ntBASIC-2.44□□□□□ -2.8
HIST1H1AQ02539 RNA5SP272-201ENST00000516095 111 ntBASIC-2.44□□□□□ -2.8
HIST1H1AQ02539 AL603755.1-201ENST00000619504 163 ntBASIC-2.44□□□□□ -2.8
HIST1H1AQ02539 RNU6-845P-201ENST00000362578 103 ntBASIC-2.45□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.45□□□□□ -2.8
HIST1H1AQ02539 SNORD63.1-201ENST00000516178 80 ntBASIC-2.45□□□□□ -2.8
HIST1H1AQ02539 MIR4308-201ENST00000580634 81 ntBASIC-2.45□□□□□ -2.8
HIST1H1AQ02539 RNY4P27-201ENST00000363341 96 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 SNORD115-33-201ENST00000363723 82 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 SNORD18.1-201ENST00000363807 70 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.521-201ENST00000384560 114 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 MT-TT-201ENST00000387460 66 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 RNU6-956P-201ENST00000458868 103 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 RNU6-732P-201ENST00000516033 103 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 RNU2-35P-201ENST00000516446 142 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.46□□□□□ -2.8
HIST1H1AQ02539 SNORD36A-201ENST00000362874 73 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 SNORA63.6-201ENST00000364921 119 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 Y_RNA.428-201ENST00000384078 102 ntBASIC-2.47□□□□□ -2.8
HIST1H1AQ02539 RNU6-466P-201ENST00000391224 103 ntBASIC-2.47□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms