Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 SNORD116-6-201ENST00000384711 96 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CCL20P78556 RNU2-35P-201ENST00000516446 142 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 AC007012.1-201ENST00000567192 175 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 AC090574.1-201ENST00000623186 233 ntBASIC-1.32□□□□□ -2.62
CCL20P78556 RNU6-973P-201ENST00000364690 107 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 RNU6-690P-201ENST00000365242 106 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 MIR517B-201ENST00000385102 67 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 RNU4-43P-201ENST00000410628 137 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 RNU4-69P-201ENST00000410677 143 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 AC022137.1-201ENST00000483735 151 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCL20P78556 RNU6-138P-201ENST00000515952 107 ntBASIC-1.33□□□□□ -2.62
CCL20P78556 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.33□□□□□ -2.62
CCL20P78556 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 SNORA63.7-201ENST00000365579 123 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 MIR516A2-201ENST00000384888 90 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 MIR516A1-201ENST00000385033 90 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 MIR4636-201ENST00000582271 80 ntBASIC-1.34□□□□□ -2.62
CCL20P78556 SNORD95.1-201ENST00000364099 68 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 MIR1302-11-201ENST00000408051 138 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 MIR1302-9-201ENST00000408365 138 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 MIR1302-10-201ENST00000408734 138 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU6-121P-201ENST00000410525 99 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 AP000533.3-201ENST00000447704 118 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU7-152P-201ENST00000458982 64 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU7-2P-201ENST00000516096 62 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNA5SP480-201ENST00000516840 109 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU6-850P-201ENST00000516934 103 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 AC026407.1-201ENST00000518369 204 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 IGKV1-22-201ENST00000524313 326 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 MIR5704-201ENST00000584029 77 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 AC009779.6-201ENST00000603972 165 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 RNU2-4P-201ENST00000606190 192 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 MIR1302-2-201ENST00000607096 138 ntBASIC-1.35□□□□□ -2.63
CCL20P78556 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 RNU6-472P-201ENST00000384299 107 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 SNORD77B-201ENST00000391112 67 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 RNU6-976P-201ENST00000516086 111 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 MIR376B-201ENST00000614515 100 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 U4.1-201ENST00000620349 87 ntBASIC-1.36□□□□□ -2.63
CCL20P78556 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.37□□□□□ -2.63
CCL20P78556 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.37□□□□□ -2.63
CCL20P78556 RNU6-381P-201ENST00000391259 108 ntBASIC-1.37□□□□□ -2.63
CCL20P78556 SNORD2-201ENST00000459163 69 ntBASIC-1.37□□□□□ -2.63
CCL20P78556 uc_338.19-201ENST00000616808 99 ntBASIC-1.37□□□□□ -2.63
CCL20P78556 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.38□□□□□ -2.63
CCL20P78556 RNA5SP368-201ENST00000364298 116 ntBASIC-1.38□□□□□ -2.63
CCL20P78556 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.38□□□□□ -2.63
CCL20P78556 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.38□□□□□ -2.63
CCL20P78556 TRDV1-202ENST00000621643 102 ntBASIC-1.38□□□□□ -2.63
CCL20P78556 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.38□□□□□ -2.63
CCL20P78556 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 AL121914.1-201ENST00000450188 156 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 MIR6854-201ENST00000614935 69 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 AC087741.2-201ENST00000619415 172 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 U6.100-201ENST00000636230 99 ntBASIC-1.39□□□□□ -2.63
CCL20P78556 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 RNU6-876P-201ENST00000391295 104 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 AL500527.2-201ENST00000454105 95 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 RNU6-277P-201ENST00000516272 106 ntBASIC-1.4□□□□□ -2.63
CCL20P78556 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 SNORD74.6-201ENST00000364796 70 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 SNORD115-35-201ENST00000365122 82 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 MTATP6P23-201ENST00000440153 476 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 RNU7-164P-201ENST00000459221 62 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 SERF1AP1-201ENST00000514575 187 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 AC140658.3-201ENST00000567603 271 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 AC138907.4-201ENST00000570107 226 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 AC021443.1-201ENST00000604478 211 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 AC080013.6-201ENST00000606185 215 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 MIR1302-1-201ENST00000637932 143 ntBASIC-1.41□□□□□ -2.64
CCL20P78556 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.42□□□□□ -2.64
CCL20P78556 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.42□□□□□ -2.64
CCL20P78556 RNU6-476P-201ENST00000384726 107 ntBASIC-1.42□□□□□ -2.64
CCL20P78556 MT-TL1-201ENST00000386347 75 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms