Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 Y_RNA.448-201ENST00000384185 108 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 MT-TI-201ENST00000387365 69 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 RNU6-1321P-201ENST00000390905 107 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 AL158147.1-201ENST00000443970 75 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 RNU6-469P-201ENST00000516253 101 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 RNU6-346P-201ENST00000516288 111 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 MIR151B-201ENST00000584249 96 ntBASIC0.47□□□□□ -2.33
CX3CL1P78423 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CX3CL1P78423 Y_RNA.119-201ENST00000363301 96 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 RNY1P2-201ENST00000364820 117 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 Y_RNA.343-201ENST00000365354 112 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 RNU6-616P-201ENST00000384353 107 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 RNU6-1307P-201ENST00000391012 103 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 MTND4LP9-201ENST00000427694 174 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
CX3CL1P78423 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
CX3CL1P78423 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 Y_RNA.568-201ENST00000384742 113 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 MIR1263-201ENST00000408324 86 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 RNA5SP136-201ENST00000410906 107 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 RNU7-48P-201ENST00000458875 63 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 RNU7-2P-201ENST00000516096 62 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 RNU6-781P-201ENST00000516377 101 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 AC087741.2-201ENST00000619415 172 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
CX3CL1P78423 Y_RNA.213-201ENST00000364178 111 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 MT-TR-201ENST00000387439 65 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 RNU6-257P-201ENST00000410238 98 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 RNU6-135P-201ENST00000516769 101 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 RNU7-6P-201ENST00000516845 62 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 MIR3163-201ENST00000581592 73 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 TUG1_4.1-201ENST00000619464 181 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.44□□□□□ -2.34
CX3CL1P78423 MIR101-2-201ENST00000362195 79 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 RNU6-235P-201ENST00000362644 107 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 SNORA36.1-201ENST00000363424 132 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 SNORA63.5-201ENST00000363548 123 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 Y_RNA.198-201ENST00000364013 98 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 Y_RNA.226-201ENST00000364337 114 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 MIRLET7F2-201ENST00000385277 83 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 SNORA40-201ENST00000388090 126 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 MIR1287-201ENST00000408492 90 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
CX3CL1P78423 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
CX3CL1P78423 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.43□□□□□ -2.34
CX3CL1P78423 SNORD115-19-201ENST00000363098 82 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 SNORD115-18-201ENST00000363293 82 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 RNA5SP245-201ENST00000364239 121 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 SNORD115-17-201ENST00000364612 82 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 SNORA8.2-201ENST00000384372 139 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 RNU6-429P-201ENST00000384582 108 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 RNU6-1223P-201ENST00000517124 104 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 AL078603.1-201ENST00000603824 313 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 AP001362.1-201ENST00000625165 124 ntBASIC0.42□□□□□ -2.34
CX3CL1P78423 Y_RNA.98-201ENST00000363109 102 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 RNU6-865P-201ENST00000364772 107 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 SNORD115-35-201ENST00000365122 82 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 Y_RNA.528-201ENST00000384575 108 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 MIR518A1-201ENST00000385068 85 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 RNU6-735P-201ENST00000410612 107 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 SNORD71-201ENST00000411292 86 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 Y_RNA.773-201ENST00000607168 90 ntBASIC0.41□□□□□ -2.34
CX3CL1P78423 RNA5SP347-201ENST00000362445 119 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 Y_RNA.127-201ENST00000363386 109 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 Y_RNA.328-201ENST00000365208 113 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 SNORD58C-201ENST00000365223 64 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 RNA5SP220-201ENST00000516298 104 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 MIR376B-201ENST00000614515 100 ntBASIC0.4□□□□□ -2.35
CX3CL1P78423 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 Y_RNA.56-201ENST00000362798 112 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 RNA5SP499-201ENST00000363982 119 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 RNU6-1229P-201ENST00000364295 107 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 MIR759-201ENST00000390224 91 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 AC092628.1-201ENST00000436250 252 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 RNU6-1061P-201ENST00000516530 99 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 RNU6-1234P-201ENST00000516877 103 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 SCARNA16.5-201ENST00000517114 183 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 RNA5SP47-201ENST00000517230 109 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 MIR4639-201ENST00000584938 69 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 MIR1255B1-201ENST00000636325 63 ntBASIC0.39□□□□□ -2.35
CX3CL1P78423 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
CX3CL1P78423 SNORD28-201ENST00000384706 75 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 RNA5SP247-201ENST00000411181 105 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 AC098934.3-201ENST00000430450 190 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 SUMO1P3-201ENST00000439961 304 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 RNA5SP268-201ENST00000516828 124 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 MIR548H5-201ENST00000580314 60 ntBASIC0.38□□□□□ -2.35
CX3CL1P78423 AC025166.1-201ENST00000612411 163 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms