Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL359821.1-201ENST00000605519 182 ntBASIC0.98□□□□□ -2.25
RAE1P78406 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RMST_2.1-201ENST00000617263 136 ntBASIC0.98□□□□□ -2.25
RAE1P78406 RNY1P10-201ENST00000363268 113 ntBASIC0.97□□□□□ -2.25
RAE1P78406 SNORA63.5-201ENST00000363548 123 ntBASIC0.97□□□□□ -2.25
RAE1P78406 Y_RNA.164-201ENST00000363709 102 ntBASIC0.97□□□□□ -2.25
RAE1P78406 Y_RNA.327-201ENST00000365201 102 ntBASIC0.97□□□□□ -2.25
RAE1P78406 Y_RNA.676-201ENST00000516393 96 ntBASIC0.97□□□□□ -2.25
RAE1P78406 RNU6-412P-201ENST00000516434 106 ntBASIC0.97□□□□□ -2.25
RAE1P78406 RNU6-521P-201ENST00000516663 105 ntBASIC0.97□□□□□ -2.25
RAE1P78406 AC138749.4-201ENST00000563970 127 ntBASIC0.97□□□□□ -2.25
RAE1P78406 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
RAE1P78406 MIR6129-201ENST00000616087 109 ntBASIC0.97□□□□□ -2.25
RAE1P78406 MIR8066-201ENST00000617280 78 ntBASIC0.97□□□□□ -2.25
RAE1P78406 U6.109-201ENST00000636749 87 ntBASIC0.97□□□□□ -2.25
RAE1P78406 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RAE1P78406 Y_RNA.42-201ENST00000362660 108 ntBASIC0.96□□□□□ -2.26
RAE1P78406 Y_RNA.49-201ENST00000362714 112 ntBASIC0.96□□□□□ -2.26
RAE1P78406 Y_RNA.98-201ENST00000363109 102 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNA5SP133-201ENST00000363368 119 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU6-865P-201ENST00000364772 107 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU6-409P-201ENST00000384114 104 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU6-364P-201ENST00000384387 107 ntBASIC0.96□□□□□ -2.26
RAE1P78406 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
RAE1P78406 SNORD105-201ENST00000386910 85 ntBASIC0.96□□□□□ -2.26
RAE1P78406 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
RAE1P78406 RNU6-765P-201ENST00000516916 99 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU7-156P-201ENST00000517214 74 ntBASIC0.96□□□□□ -2.26
RAE1P78406 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
RAE1P78406 MIR6082-201ENST00000613604 109 ntBASIC0.96□□□□□ -2.26
RAE1P78406 AP001362.1-201ENST00000625165 124 ntBASIC0.96□□□□□ -2.26
RAE1P78406 RNU6-403P-201ENST00000363163 104 ntBASIC0.95□□□□□ -2.26
RAE1P78406 Y_RNA.328-201ENST00000365208 113 ntBASIC0.95□□□□□ -2.26
RAE1P78406 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RAE1P78406 SNORA72.6-201ENST00000384520 129 ntBASIC0.95□□□□□ -2.26
RAE1P78406 SNORD20-201ENST00000384550 80 ntBASIC0.95□□□□□ -2.26
RAE1P78406 RNU6-321P-201ENST00000410912 106 ntBASIC0.95□□□□□ -2.26
RAE1P78406 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.95□□□□□ -2.26
RAE1P78406 RNU7-56P-201ENST00000458744 62 ntBASIC0.95□□□□□ -2.26
RAE1P78406 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
RAE1P78406 RNU6-1194P-201ENST00000516208 104 ntBASIC0.95□□□□□ -2.26
RAE1P78406 RNU6-589P-201ENST00000516485 107 ntBASIC0.95□□□□□ -2.26
RAE1P78406 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
RAE1P78406 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RAE1P78406 Y_RNA.4-201ENST00000362333 112 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU6-1313P-201ENST00000362622 102 ntBASIC0.94□□□□□ -2.26
RAE1P78406 Y_RNA.155-201ENST00000363632 101 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU6-1325P-201ENST00000364905 105 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU6-1335P-201ENST00000365426 107 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU6-679P-201ENST00000391003 106 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU1-119P-201ENST00000391122 165 ntBASIC0.94□□□□□ -2.26
RAE1P78406 SNORA7.5-201ENST00000410672 110 ntBASIC0.94□□□□□ -2.26
RAE1P78406 AL353813.1-201ENST00000440700 253 ntBASIC0.94□□□□□ -2.26
RAE1P78406 RNU7-102P-201ENST00000458948 62 ntBASIC0.94□□□□□ -2.26
RAE1P78406 AC068339.1-201ENST00000526965 141 ntBASIC0.94□□□□□ -2.26
RAE1P78406 AP003327.1-201ENST00000529684 127 ntBASIC0.94□□□□□ -2.26
RAE1P78406 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
RAE1P78406 MIR376B-201ENST00000614515 100 ntBASIC0.94□□□□□ -2.26
RAE1P78406 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RAE1P78406 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
RAE1P78406 Y_RNA.13-201ENST00000362403 112 ntBASIC0.93□□□□□ -2.26
RAE1P78406 RNU4-58P-201ENST00000363192 141 ntBASIC0.93□□□□□ -2.26
RAE1P78406 U8.6-201ENST00000364939 135 ntBASIC0.93□□□□□ -2.26
RAE1P78406 Y_RNA.323-201ENST00000365157 109 ntBASIC0.93□□□□□ -2.26
RAE1P78406 RNU6-215P-201ENST00000365169 102 ntBASIC0.93□□□□□ -2.26
RAE1P78406 MIR520H-201ENST00000385126 88 ntBASIC0.93□□□□□ -2.26
RAE1P78406 RNU6-733P-201ENST00000410759 104 ntBASIC0.93□□□□□ -2.26
RAE1P78406 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
RAE1P78406 RNU6-1018P-201ENST00000516577 106 ntBASIC0.93□□□□□ -2.26
RAE1P78406 SNORA25.16-201ENST00000516741 121 ntBASIC0.93□□□□□ -2.26
RAE1P78406 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
RAE1P78406 Y_RNA.119-201ENST00000363301 96 ntBASIC0.92□□□□□ -2.26
RAE1P78406 RNU6-1107P-201ENST00000364817 104 ntBASIC0.92□□□□□ -2.26
RAE1P78406 Y_RNA.709-201ENST00000516952 92 ntBASIC0.92□□□□□ -2.26
RAE1P78406 DEFB131E-201ENST00000532329 154 ntBASIC0.92□□□□□ -2.26
RAE1P78406 MIR5009-201ENST00000578736 100 ntBASIC0.92□□□□□ -2.26
RAE1P78406 AC008608.1-201ENST00000603910 127 ntBASIC0.92□□□□□ -2.26
RAE1P78406 Y_RNA.360-201ENST00000365512 102 ntBASIC0.91□□□□□ -2.26
RAE1P78406 MIR34C-201ENST00000384831 77 ntBASIC0.91□□□□□ -2.26
RAE1P78406 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.91□□□□□ -2.26
RAE1P78406 RNU6-531P-201ENST00000516694 104 ntBASIC0.91□□□□□ -2.26
RAE1P78406 RNU6-392P-201ENST00000364926 101 ntBASIC0.9□□□□□ -2.27
RAE1P78406 RNU6-1201P-201ENST00000384227 107 ntBASIC0.9□□□□□ -2.27
RAE1P78406 MIR605-201ENST00000385078 83 ntBASIC0.9□□□□□ -2.27
RAE1P78406 RNY4P18-201ENST00000391107 89 ntBASIC0.9□□□□□ -2.27
RAE1P78406 MIR4694-201ENST00000578534 80 ntBASIC0.9□□□□□ -2.27
RAE1P78406 AC090897.1-201ENST00000580909 226 ntBASIC0.9□□□□□ -2.27
RAE1P78406 AL512310.12-203ENST00000640543 90 ntBASIC0.9□□□□□ -2.27
RAE1P78406 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
RAE1P78406 Y_RNA.116-201ENST00000363292 103 ntBASIC0.89□□□□□ -2.27
RAE1P78406 Y_RNA.377-201ENST00000365644 108 ntBASIC0.89□□□□□ -2.27
RAE1P78406 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RAE1P78406 RNU6-1014P-201ENST00000383940 103 ntBASIC0.89□□□□□ -2.27
RAE1P78406 SNORD38.2-201ENST00000384470 69 ntBASIC0.89□□□□□ -2.27
RAE1P78406 MIR573-201ENST00000384964 99 ntBASIC0.89□□□□□ -2.27
RAE1P78406 RNU6-1006P-201ENST00000516998 103 ntBASIC0.89□□□□□ -2.27
RAE1P78406 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.89□□□□□ -2.27
RAE1P78406 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RAE1P78406 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 244.9 ms