Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNA5SP236-201ENST00000516169 116 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 RNU6-635P-201ENST00000516651 102 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 MIR4500-201ENST00000579472 76 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 MIR548H5-201ENST00000580314 60 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 AP001180.6-201ENST00000584918 159 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 AL356055.1-201ENST00000602528 446 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 MIR8062-201ENST00000621515 85 ntBASIC-0.37□□□□□ -2.47
VSX2P58304 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 MIR1265-201ENST00000408444 86 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 AC096531.1-201ENST00000419107 107 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 MTCYBP6-201ENST00000441810 138 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.38□□□□□ -2.47
VSX2P58304 MIR6086-201ENST00000638065 55 ntBASIC-0.38□□□□□ -2.47
VSX2P58304 SNORA25.7-201ENST00000364375 127 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 RNU6-449P-201ENST00000383914 107 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 RNU6-643P-201ENST00000384018 107 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 RNU6-713P-201ENST00000384761 107 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 MIR635-201ENST00000384830 98 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 SNORD110-201ENST00000408189 75 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 MIR1302-6-201ENST00000408466 90 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 RNA5SP484-201ENST00000458857 111 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
VSX2P58304 NAMPTP3-201ENST00000569273 224 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 MIR4308-201ENST00000580634 81 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 MIR4493-201ENST00000584016 73 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 MIR6514-201ENST00000622549 70 ntBASIC-0.39□□□□□ -2.47
VSX2P58304 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.39□□□□□ -2.47
VSX2P58304 RNA5SP98-201ENST00000363158 137 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 RNY4P28-201ENST00000365281 93 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 MIR599-201ENST00000385069 95 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 BX276092.1-201ENST00000427368 251 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 AC098479.1-201ENST00000609225 154 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 U7.6-201ENST00000610841 64 ntBASIC-0.4□□□□□ -2.47
VSX2P58304 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.4□□□□□ -2.47
VSX2P58304 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 RNU6-690P-201ENST00000365242 106 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 RNU6-46P-201ENST00000383860 107 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 RNU6-639P-201ENST00000384074 107 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 RNA5SP300-201ENST00000391197 107 ntBASIC-0.41□□□□□ -2.48
VSX2P58304 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 Z95118.1-201ENST00000421372 247 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 AL117351.2-201ENST00000513571 157 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 RNU6-240P-201ENST00000516098 97 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 MIR3920-201ENST00000581751 86 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 AC073869.9-201ENST00000641610 120 ntBASIC-0.42□□□□□ -2.48
VSX2P58304 RNU6-508P-201ENST00000363231 103 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.43□□□□□ -2.48
VSX2P58304 MTND4LP11-201ENST00000422184 280 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 AC006210.1-201ENST00000424882 111 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.43□□□□□ -2.48
VSX2P58304 AC009779.6-201ENST00000603972 165 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 MIR3666-201ENST00000607845 111 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 AC084368.1-201ENST00000620935 65 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 U6.106-201ENST00000636360 105 ntBASIC-0.43□□□□□ -2.48
VSX2P58304 RNU6-867P-201ENST00000364956 107 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 RNU6-768P-201ENST00000384683 107 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 MIR206-201ENST00000384872 86 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 MIR196A2-201ENST00000385189 110 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 MIR876-201ENST00000401147 81 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 RNU7-195P-201ENST00000458793 62 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 CR383656.4-201ENST00000546909 122 ntBASIC-0.44□□□□□ -2.48
VSX2P58304 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 MIR516B1-201ENST00000385211 90 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 RNU7-106P-201ENST00000459514 67 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 RNU7-10P-201ENST00000607194 63 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 RN7SL660P-201ENST00000614852 299 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
VSX2P58304 RNU6-275P-201ENST00000364910 107 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 SNORA75.1-201ENST00000391130 148 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU4-69P-201ENST00000410677 143 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU2-38P-201ENST00000410856 79 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU7-48P-201ENST00000458875 63 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU7-164P-201ENST00000459221 62 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 HAR1A.1-201ENST00000459583 118 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU7-123P-201ENST00000515911 60 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 RNU6-758P-201ENST00000516292 89 ntBASIC-0.46□□□□□ -2.48
VSX2P58304 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.47□□□□□ -2.48
VSX2P58304 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms