Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
CDH13P55290 SCARNA16.5-201ENST00000517114 183 ntBASIC0.31□□□□□ -2.36
CDH13P55290 AC138749.4-201ENST00000563970 127 ntBASIC0.31□□□□□ -2.36
CDH13P55290 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
CDH13P55290 U6.109-201ENST00000636749 87 ntBASIC0.31□□□□□ -2.36
CDH13P55290 RNU6-1229P-201ENST00000364295 107 ntBASIC0.3□□□□□ -2.36
CDH13P55290 RNY1P2-201ENST00000364820 117 ntBASIC0.3□□□□□ -2.36
CDH13P55290 RNU4-11P-201ENST00000365287 132 ntBASIC0.3□□□□□ -2.36
CDH13P55290 VTRNA1-3-201ENST00000365645 89 ntBASIC0.3□□□□□ -2.36
CDH13P55290 MIR489-201ENST00000384923 84 ntBASIC0.3□□□□□ -2.36
CDH13P55290 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
CDH13P55290 RNA5SP268-201ENST00000516828 124 ntBASIC0.3□□□□□ -2.36
CDH13P55290 RNU6-182P-201ENST00000516970 105 ntBASIC0.3□□□□□ -2.36
CDH13P55290 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
CDH13P55290 AL359881.1-201ENST00000602916 267 ntBASIC0.3□□□□□ -2.36
CDH13P55290 Y_RNA.778-201ENST00000620203 90 ntBASIC0.3□□□□□ -2.36
CDH13P55290 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
CDH13P55290 SNORD114-23-201ENST00000363536 72 ntBASIC0.29□□□□□ -2.36
CDH13P55290 RNU6-449P-201ENST00000383914 107 ntBASIC0.29□□□□□ -2.36
CDH13P55290 SNORD28-201ENST00000384706 75 ntBASIC0.29□□□□□ -2.36
CDH13P55290 SNORD77B-201ENST00000391112 67 ntBASIC0.29□□□□□ -2.36
CDH13P55290 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
CDH13P55290 AL137067.1-201ENST00000615933 120 ntBASIC0.29□□□□□ -2.36
CDH13P55290 MIR103A1-201ENST00000362165 78 ntBASIC0.28□□□□□ -2.36
CDH13P55290 MIR101-2-201ENST00000362195 79 ntBASIC0.28□□□□□ -2.36
CDH13P55290 Y_RNA.119-201ENST00000363301 96 ntBASIC0.28□□□□□ -2.36
CDH13P55290 RNU6-429P-201ENST00000384582 108 ntBASIC0.28□□□□□ -2.36
CDH13P55290 RNU2-59P-201ENST00000410482 191 ntBASIC0.28□□□□□ -2.36
CDH13P55290 RNU7-197P-201ENST00000458836 62 ntBASIC0.28□□□□□ -2.36
CDH13P55290 MIR1270-201ENST00000459320 83 ntBASIC0.28□□□□□ -2.36
CDH13P55290 PVT1_3.1-201ENST00000620853 95 ntBASIC0.28□□□□□ -2.36
CDH13P55290 AC091304.10-201ENST00000641554 121 ntBASIC0.28□□□□□ -2.36
CDH13P55290 RNU6-508P-201ENST00000363231 103 ntBASIC0.27□□□□□ -2.37
CDH13P55290 RNU6-394P-201ENST00000410735 107 ntBASIC0.27□□□□□ -2.37
CDH13P55290 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.26□□□□□ -2.37
CDH13P55290 RNU6-151P-201ENST00000364158 107 ntBASIC0.26□□□□□ -2.37
CDH13P55290 AC074198.2-201ENST00000508153 258 ntBASIC0.26□□□□□ -2.37
CDH13P55290 MIR3121-201ENST00000579680 77 ntBASIC0.26□□□□□ -2.37
CDH13P55290 SUMO1P3-201ENST00000439961 304 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNU6-848P-201ENST00000515948 107 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNU6-617P-201ENST00000516147 107 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNU6-473P-201ENST00000516164 107 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNA5SP227-201ENST00000516184 113 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNU6-1049P-201ENST00000516414 107 ntBASIC0.25□□□□□ -2.37
CDH13P55290 Y_RNA.692-201ENST00000516627 105 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNY4P20-201ENST00000516678 93 ntBASIC0.25□□□□□ -2.37
CDH13P55290 MIR548H5-201ENST00000580314 60 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
CDH13P55290 RNU7-10P-201ENST00000607194 63 ntBASIC0.25□□□□□ -2.37
CDH13P55290 AC105081.1-201ENST00000617727 106 ntBASIC0.25□□□□□ -2.37
CDH13P55290 AC244669.1-204ENST00000621564 178 ntBASIC0.25□□□□□ -2.37
CDH13P55290 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CDH13P55290 RNU6-1321P-201ENST00000390905 107 ntBASIC0.24□□□□□ -2.37
CDH13P55290 MIR513C-201ENST00000401352 84 ntBASIC0.24□□□□□ -2.37
CDH13P55290 AC244505.6-201ENST00000452829 130 ntBASIC0.24□□□□□ -2.37
CDH13P55290 AC138869.1-201ENST00000568623 124 ntBASIC0.24□□□□□ -2.37
CDH13P55290 AC108081.1-201ENST00000604358 221 ntBASIC0.24□□□□□ -2.37
CDH13P55290 MIR7107-201ENST00000611489 80 ntBASIC0.24□□□□□ -2.37
CDH13P55290 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
CDH13P55290 Y_RNA.36-201ENST00000362602 112 ntBASIC0.23□□□□□ -2.37
CDH13P55290 Y_RNA.98-201ENST00000363109 102 ntBASIC0.23□□□□□ -2.37
CDH13P55290 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
CDH13P55290 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
CDH13P55290 RNY1P4-201ENST00000384595 115 ntBASIC0.23□□□□□ -2.37
CDH13P55290 MIR206-201ENST00000384872 86 ntBASIC0.23□□□□□ -2.37
CDH13P55290 RNU7-48P-201ENST00000458875 63 ntBASIC0.23□□□□□ -2.37
CDH13P55290 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CDH13P55290 FTX_2.1-201ENST00000618816 94 ntBASIC0.23□□□□□ -2.37
CDH13P55290 AP001340.1-201ENST00000624405 217 ntBASIC0.23□□□□□ -2.37
CDH13P55290 RNU6-1130P-201ENST00000365434 107 ntBASIC0.22□□□□□ -2.37
CDH13P55290 RNU6-1126P-201ENST00000384002 107 ntBASIC0.22□□□□□ -2.37
CDH13P55290 RNU5E-3P-201ENST00000515913 68 ntBASIC0.22□□□□□ -2.37
CDH13P55290 TUG1_4.1-201ENST00000619464 181 ntBASIC0.22□□□□□ -2.37
CDH13P55290 SNORA63.5-201ENST00000363548 123 ntBASIC0.21□□□□□ -2.38
CDH13P55290 RNU6-915P-201ENST00000364943 103 ntBASIC0.21□□□□□ -2.38
CDH13P55290 SNORD116-18-201ENST00000383961 92 ntBASIC0.21□□□□□ -2.38
CDH13P55290 RNU6-460P-201ENST00000391158 108 ntBASIC0.21□□□□□ -2.38
CDH13P55290 RNU7-2P-201ENST00000516096 62 ntBASIC0.21□□□□□ -2.38
CDH13P55290 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
CDH13P55290 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
CDH13P55290 Y_RNA.448-201ENST00000384185 108 ntBASIC0.2□□□□□ -2.38
CDH13P55290 RNU6-1104P-201ENST00000384723 104 ntBASIC0.2□□□□□ -2.38
CDH13P55290 MIR193B-201ENST00000384907 83 ntBASIC0.2□□□□□ -2.38
CDH13P55290 PCNPP3-201ENST00000393579 471 ntBASIC0.2□□□□□ -2.38
CDH13P55290 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
CDH13P55290 AC069113.3-201ENST00000521019 150 ntBASIC0.2□□□□□ -2.38
CDH13P55290 MIR3144-201ENST00000579460 79 ntBASIC0.2□□□□□ -2.38
CDH13P55290 MIR548X2-201ENST00000579776 100 ntBASIC0.2□□□□□ -2.38
CDH13P55290 Y_RNA.270-201ENST00000364693 104 ntBASIC0.19□□□□□ -2.38
CDH13P55290 SNORD115-35-201ENST00000365122 82 ntBASIC0.19□□□□□ -2.38
CDH13P55290 AC069271.1-201ENST00000445577 156 ntBASIC0.19□□□□□ -2.38
CDH13P55290 SNORA62.5-201ENST00000516634 120 ntBASIC0.19□□□□□ -2.38
CDH13P55290 AP001328.1-201ENST00000528550 176 ntBASIC0.19□□□□□ -2.38
CDH13P55290 MIR7111-201ENST00000619751 72 ntBASIC0.19□□□□□ -2.38
CDH13P55290 AP001362.1-201ENST00000625165 124 ntBASIC0.19□□□□□ -2.38
CDH13P55290 Y_RNA.127-201ENST00000363386 109 ntBASIC0.18□□□□□ -2.38
CDH13P55290 SNORD115-24-201ENST00000363528 82 ntBASIC0.18□□□□□ -2.38
CDH13P55290 RNU6-647P-201ENST00000364243 107 ntBASIC0.18□□□□□ -2.38
CDH13P55290 Y_RNA.328-201ENST00000365208 113 ntBASIC0.18□□□□□ -2.38
CDH13P55290 Y_RNA.400-201ENST00000383963 111 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms