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Protein–RNA interactions for Protein: P55290
CDH13, Cadherin-13, human
Predictions only
Length
713 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH13
P55290
Y_RNA.686-201
ENST00000516548
134 nt
BASIC
0.31
□□□□□ -2.36
CDH13
P55290
SCARNA16.5-201
ENST00000517114
183 nt
BASIC
0.31
□□□□□ -2.36
CDH13
P55290
AC138749.4-201
ENST00000563970
127 nt
BASIC
0.31
□□□□□ -2.36
CDH13
P55290
SNORA25.18-201
ENST00000607153
114 nt
BASIC
0.31
□□□□□ -2.36
CDH13
P55290
U6.109-201
ENST00000636749
87 nt
BASIC
0.31
□□□□□ -2.36
CDH13
P55290
RNU6-1229P-201
ENST00000364295
107 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
RNY1P2-201
ENST00000364820
117 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
RNU4-11P-201
ENST00000365287
132 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
VTRNA1-3-201
ENST00000365645
89 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
MIR489-201
ENST00000384923
84 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
AC108740.1-201
ENST00000498629
225 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
RNA5SP268-201
ENST00000516828
124 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
RNU6-182P-201
ENST00000516970
105 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
RNA5SP47-201
ENST00000517230
109 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
AL359881.1-201
ENST00000602916
267 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
Y_RNA.778-201
ENST00000620203
90 nt
BASIC
0.3
□□□□□ -2.36
CDH13
P55290
Y_RNA.56-201
ENST00000362798
112 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
SNORD114-23-201
ENST00000363536
72 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
RNU6-449P-201
ENST00000383914
107 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
SNORD28-201
ENST00000384706
75 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
SNORD77B-201
ENST00000391112
67 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
SNRPGP12-201
ENST00000449481
213 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
AL137067.1-201
ENST00000615933
120 nt
BASIC
0.29
□□□□□ -2.36
CDH13
P55290
MIR103A1-201
ENST00000362165
78 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
MIR101-2-201
ENST00000362195
79 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
Y_RNA.119-201
ENST00000363301
96 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
RNU6-429P-201
ENST00000384582
108 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
RNU2-59P-201
ENST00000410482
191 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
RNU7-197P-201
ENST00000458836
62 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
MIR1270-201
ENST00000459320
83 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
PVT1_3.1-201
ENST00000620853
95 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
AC091304.10-201
ENST00000641554
121 nt
BASIC
0.28
□□□□□ -2.36
CDH13
P55290
RNU6-508P-201
ENST00000363231
103 nt
BASIC
0.27
□□□□□ -2.37
CDH13
P55290
RNU6-394P-201
ENST00000410735
107 nt
BASIC
0.27
□□□□□ -2.37
CDH13
P55290
AC108866.1-201
ENST00000503073
2339 nt
TSL 5
BASIC
0.26
□□□□□ -2.37
CDH13
P55290
RNU6-151P-201
ENST00000364158
107 nt
BASIC
0.26
□□□□□ -2.37
CDH13
P55290
AC074198.2-201
ENST00000508153
258 nt
BASIC
0.26
□□□□□ -2.37
CDH13
P55290
MIR3121-201
ENST00000579680
77 nt
BASIC
0.26
□□□□□ -2.37
CDH13
P55290
SUMO1P3-201
ENST00000439961
304 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU6-848P-201
ENST00000515948
107 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU6-617P-201
ENST00000516147
107 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU6-473P-201
ENST00000516164
107 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNA5SP227-201
ENST00000516184
113 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU6-1049P-201
ENST00000516414
107 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
Y_RNA.692-201
ENST00000516627
105 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNY4P20-201
ENST00000516678
93 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
MIR548H5-201
ENST00000580314
60 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RN7SL793P-201
ENST00000583259
296 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU7-10P-201
ENST00000607194
63 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
AC105081.1-201
ENST00000617727
106 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
AC244669.1-204
ENST00000621564
178 nt
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
CEP290-203
ENST00000547691
5968 nt
TSL 1 (best)
BASIC
0.25
□□□□□ -2.37
CDH13
P55290
RNU6-1321P-201
ENST00000390905
107 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
MIR513C-201
ENST00000401352
84 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
AC244505.6-201
ENST00000452829
130 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
AC138869.1-201
ENST00000568623
124 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
AC108081.1-201
ENST00000604358
221 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
MIR7107-201
ENST00000611489
80 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
AC010487.4-201
ENST00000637027
61 nt
BASIC
0.24
□□□□□ -2.37
CDH13
P55290
Y_RNA.36-201
ENST00000362602
112 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
Y_RNA.98-201
ENST00000363109
102 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
RNA5SP62-201
ENST00000363457
110 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
RNA5SP245-201
ENST00000364239
121 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
RNY1P4-201
ENST00000384595
115 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
MIR206-201
ENST00000384872
86 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
RNU7-48P-201
ENST00000458875
63 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
MIR5093-201
ENST00000583199
100 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
FTX_2.1-201
ENST00000618816
94 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
AP001340.1-201
ENST00000624405
217 nt
BASIC
0.23
□□□□□ -2.37
CDH13
P55290
RNU6-1130P-201
ENST00000365434
107 nt
BASIC
0.22
□□□□□ -2.37
CDH13
P55290
RNU6-1126P-201
ENST00000384002
107 nt
BASIC
0.22
□□□□□ -2.37
CDH13
P55290
RNU5E-3P-201
ENST00000515913
68 nt
BASIC
0.22
□□□□□ -2.37
CDH13
P55290
TUG1_4.1-201
ENST00000619464
181 nt
BASIC
0.22
□□□□□ -2.37
CDH13
P55290
SNORA63.5-201
ENST00000363548
123 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
RNU6-915P-201
ENST00000364943
103 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
SNORD116-18-201
ENST00000383961
92 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
RNU6-460P-201
ENST00000391158
108 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
RNU7-2P-201
ENST00000516096
62 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
MIR4315-1-201
ENST00000636800
73 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
MIR4315-2-201
ENST00000640925
73 nt
BASIC
0.21
□□□□□ -2.38
CDH13
P55290
Y_RNA.448-201
ENST00000384185
108 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
RNU6-1104P-201
ENST00000384723
104 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
MIR193B-201
ENST00000384907
83 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
PCNPP3-201
ENST00000393579
471 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
AC073261.1-201
ENST00000429409
121 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
AC069113.3-201
ENST00000521019
150 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
MIR3144-201
ENST00000579460
79 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
MIR548X2-201
ENST00000579776
100 nt
BASIC
0.2
□□□□□ -2.38
CDH13
P55290
Y_RNA.270-201
ENST00000364693
104 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
SNORD115-35-201
ENST00000365122
82 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
AC069271.1-201
ENST00000445577
156 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
SNORA62.5-201
ENST00000516634
120 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
AP001328.1-201
ENST00000528550
176 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
MIR7111-201
ENST00000619751
72 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
AP001362.1-201
ENST00000625165
124 nt
BASIC
0.19
□□□□□ -2.38
CDH13
P55290
Y_RNA.127-201
ENST00000363386
109 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
SNORD115-24-201
ENST00000363528
82 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
RNU6-647P-201
ENST00000364243
107 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
Y_RNA.328-201
ENST00000365208
113 nt
BASIC
0.18
□□□□□ -2.38
CDH13
P55290
Y_RNA.400-201
ENST00000383963
111 nt
BASIC
0.18
□□□□□ -2.38
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Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms