Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
HCFC1P51610 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 RNU6-412P-201ENST00000516434 106 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 MIR3163-201ENST00000581592 73 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 MIR548AE2-201ENST00000583456 67 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 AC105081.1-201ENST00000617727 106 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 RNU4-58P-201ENST00000363192 141 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 Y_RNA.586-201ENST00000391146 98 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 AL606753.1-201ENST00000427435 87 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 U7.7-201ENST00000459276 60 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 AC138749.4-201ENST00000563970 127 ntBASIC0.67□□□□□ -2.3
HCFC1P51610 RNU6-1325P-201ENST00000364905 105 ntBASIC0.66□□□□□ -2.3
HCFC1P51610 SNORA22-201ENST00000383907 134 ntBASIC0.66□□□□□ -2.3
HCFC1P51610 RNU7-48P-201ENST00000458875 63 ntBASIC0.66□□□□□ -2.3
HCFC1P51610 AC090897.1-201ENST00000580909 226 ntBASIC0.66□□□□□ -2.3
HCFC1P51610 SNORD92-201ENST00000585078 85 ntBASIC0.66□□□□□ -2.3
HCFC1P51610 MIR30D-201ENST00000362283 70 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 Y_RNA.198-201ENST00000364013 98 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 RNU6-1187P-201ENST00000364771 110 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 Y_RNA.281-201ENST00000364774 94 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 MIR4661-201ENST00000582720 75 ntBASIC0.65□□□□□ -2.3
HCFC1P51610 RNU6-832P-201ENST00000363319 107 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD114-24-201ENST00000365029 72 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD116-14-201ENST00000383894 92 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD116-17-201ENST00000383929 92 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD116-15-201ENST00000384445 92 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNU6-1081P-201ENST00000384537 107 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNU6-1104P-201ENST00000384723 104 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD116-19-201ENST00000384729 92 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 MIR216A-201ENST00000385063 110 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 SNORD12C-201ENST00000386307 89 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 MIR548I2-201ENST00000408348 149 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNU6-351P-201ENST00000516097 100 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNU6-1018P-201ENST00000516577 106 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 AC141846.1-201ENST00000568348 142 ntBASIC0.65□□□□□ -2.31
HCFC1P51610 RNA5SP133-201ENST00000363368 119 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 MIR518A1-201ENST00000385068 85 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 MIR1263-201ENST00000408324 86 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.64□□□□□ -2.31
HCFC1P51610 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 RNA5SP205-201ENST00000364653 136 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 RNU6-1335P-201ENST00000365426 107 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 Y_RNA.353-201ENST00000365440 108 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 MIR1273G-201ENST00000577677 100 ntBASIC0.64□□□□□ -2.31
HCFC1P51610 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
HCFC1P51610 MIR1-1-201ENST00000362147 71 ntBASIC0.63□□□□□ -2.31
HCFC1P51610 RNU4-67P-201ENST00000364569 141 ntBASIC0.63□□□□□ -2.31
HCFC1P51610 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.63□□□□□ -2.31
HCFC1P51610 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
HCFC1P51610 RNU7-156P-201ENST00000517214 74 ntBASIC0.63□□□□□ -2.31
HCFC1P51610 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
HCFC1P51610 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
HCFC1P51610 Y_RNA.35-201ENST00000362601 101 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-363P-201ENST00000362895 105 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-865P-201ENST00000364772 107 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 SNORD115-35-201ENST00000365122 82 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 MIR548D2-201ENST00000384955 97 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 MIR548A3-201ENST00000385297 97 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-447P-201ENST00000410293 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-1118P-201ENST00000410382 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-1076P-201ENST00000410397 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-355P-201ENST00000410427 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-791P-201ENST00000410467 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-705P-201ENST00000410601 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-1100P-201ENST00000410691 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-860P-201ENST00000410860 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-1217P-201ENST00000411276 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-785P-201ENST00000411324 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 SNORD83.1-201ENST00000411362 77 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-229P-201ENST00000516614 102 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU7-137P-201ENST00000516788 62 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 Y_RNA.712-201ENST00000517011 92 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 AC013244.2-201ENST00000603396 103 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 U6.90-201ENST00000614007 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 U6.70-201ENST00000620287 104 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 MIR1255B1-201ENST00000636325 63 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNA5SP257-201ENST00000363023 116 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 SNORD113-1-201ENST00000365321 69 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU4-61P-201ENST00000411243 107 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 AC244098.3-201ENST00000424803 96 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU7-2P-201ENST00000516096 62 ntBASIC0.62□□□□□ -2.31
HCFC1P51610 RNU6-429P-201ENST00000384582 108 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 RPL39P34-201ENST00000477141 156 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 Y_RNA.697-201ENST00000516776 113 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 U6.95-201ENST00000636931 70 ntBASIC0.61□□□□□ -2.31
HCFC1P51610 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
HCFC1P51610 MIR577-201ENST00000385196 96 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms