Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SNORD77B-201ENST00000391112 67 ntBASIC-1.66□□□□□ -2.68
HTTP42858 AC107399.1-201ENST00000451226 265 ntBASIC-1.66□□□□□ -2.68
HTTP42858 MRPS36P3-201ENST00000519284 130 ntBASIC-1.66□□□□□ -2.68
HTTP42858 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.67□□□□□ -2.68
HTTP42858 RNU6-596P-201ENST00000365395 98 ntBASIC-1.67□□□□□ -2.68
HTTP42858 RNU6-608P-201ENST00000383927 104 ntBASIC-1.67□□□□□ -2.68
HTTP42858 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.67□□□□□ -2.68
HTTP42858 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.67□□□□□ -2.68
HTTP42858 RNU7-154P-201ENST00000516194 62 ntBASIC-1.67□□□□□ -2.68
HTTP42858 AC022616.6-201ENST00000520479 119 ntBASIC-1.67□□□□□ -2.68
HTTP42858 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.67□□□□□ -2.68
HTTP42858 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.67□□□□□ -2.68
HTTP42858 MTATP6P15-201ENST00000527233 835 ntBASIC-1.67□□□□□ -2.68
HTTP42858 AC007485.1-201ENST00000616755 206 ntBASIC-1.67□□□□□ -2.68
HTTP42858 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 RNU6-207P-201ENST00000384137 107 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 MIR548AG1-201ENST00000579932 66 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 TRDV1-202ENST00000621643 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.68□□□□□ -2.68
HTTP42858 AL590004.1-201ENST00000405321 300 ntBASIC-1.68□□□□□ -2.68
HTTP42858 AC116353.3-201ENST00000511215 249 ntBASIC-1.68□□□□□ -2.68
HTTP42858 MIR4536-1-201ENST00000583537 88 ntBASIC-1.68□□□□□ -2.68
HTTP42858 AC021443.1-201ENST00000604478 211 ntBASIC-1.68□□□□□ -2.68
HTTP42858 AP000720.1-201ENST00000625091 483 ntBASIC-1.68□□□□□ -2.68
HTTP42858 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-468P-201ENST00000384003 109 ntBASIC-1.69□□□□□ -2.68
HTTP42858 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-141P-201ENST00000410499 105 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-625P-201ENST00000459412 107 ntBASIC-1.69□□□□□ -2.68
HTTP42858 SNORA19.3-201ENST00000516165 130 ntBASIC-1.69□□□□□ -2.68
HTTP42858 MIR2355-201ENST00000517199 87 ntBASIC-1.69□□□□□ -2.68
HTTP42858 AL512427.1-201ENST00000618593 349 ntBASIC-1.69□□□□□ -2.68
HTTP42858 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-230P-201ENST00000362457 104 ntBASIC-1.69□□□□□ -2.68
HTTP42858 SNORD113-7-201ENST00000363762 77 ntBASIC-1.69□□□□□ -2.68
HTTP42858 AC092794.2-201ENST00000620933 563 ntBASIC-1.69□□□□□ -2.68
HTTP42858 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.69□□□□□ -2.68
HTTP42858 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-106P-201ENST00000384405 107 ntBASIC-1.69□□□□□ -2.68
HTTP42858 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.69□□□□□ -2.68
HTTP42858 RNU6-383P-201ENST00000410864 94 ntBASIC-1.69□□□□□ -2.68
HTTP42858 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.69□□□□□ -2.68
HTTP42858 AC019193.3-201ENST00000609144 554 ntBASIC-1.69□□□□□ -2.68
HTTP42858 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.7□□□□□ -2.68
HTTP42858 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-987P-201ENST00000384759 104 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RBMX2P4-201ENST00000441256 376 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-911P-201ENST00000516523 104 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-126P-201ENST00000516685 103 ntBASIC-1.7□□□□□ -2.68
HTTP42858 AC005520.4-201ENST00000604337 90 ntBASIC-1.7□□□□□ -2.68
HTTP42858 AL022161.1-201ENST00000604390 213 ntBASIC-1.7□□□□□ -2.68
HTTP42858 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-845P-201ENST00000362578 103 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-595P-201ENST00000363944 107 ntBASIC-1.7□□□□□ -2.68
HTTP42858 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-144P-201ENST00000383951 107 ntBASIC-1.7□□□□□ -2.68
HTTP42858 SNORA72.4-201ENST00000384174 132 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-809P-201ENST00000384461 107 ntBASIC-1.7□□□□□ -2.68
HTTP42858 U3.27-201ENST00000391237 200 ntBASIC-1.7□□□□□ -2.68
HTTP42858 MIR548Q-201ENST00000408404 100 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-651P-201ENST00000411040 105 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-807P-201ENST00000516805 107 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.7□□□□□ -2.68
HTTP42858 AC084782.3-201ENST00000612282 578 ntBASIC-1.7□□□□□ -2.68
HTTP42858 RNU6-478P-201ENST00000363904 110 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.71□□□□□ -2.68
HTTP42858 RNA5SP144-201ENST00000410846 116 ntBASIC-1.71□□□□□ -2.68
HTTP42858 snoU13.17-201ENST00000458802 104 ntBASIC-1.71□□□□□ -2.68
HTTP42858 RNU7-187P-201ENST00000458985 68 ntBASIC-1.71□□□□□ -2.68
HTTP42858 SNORD77.4-201ENST00000516158 81 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MIR5197-201ENST00000583721 112 ntBASIC-1.71□□□□□ -2.68
HTTP42858 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MTND2P31-201ENST00000512602 616 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MIR4790-201ENST00000577799 79 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MIR4724-201ENST00000579485 89 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MIR23C-201ENST00000579846 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 MIR376B-201ENST00000614515 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 RNU6-626P-201ENST00000363354 107 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.405-201ENST00000383979 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.451-201ENST00000384200 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.524-201ENST00000384564 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.561-201ENST00000384694 100 ntBASIC-1.71□□□□□ -2.68
HTTP42858 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.71□□□□□ -2.68
HTTP42858 AC009779.6-201ENST00000603972 165 ntBASIC-1.71□□□□□ -2.68
HTTP42858 AC012531.4-201ENST00000616509 177 ntBASIC-1.71□□□□□ -2.68
HTTP42858 AL365265.1-201ENST00000621045 234 ntBASIC-1.71□□□□□ -2.68
HTTP42858 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.72□□□□□ -2.68
HTTP42858 SNORD38.2-201ENST00000384470 69 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms