Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
RORAP35398 MIR5706-201ENST00000579841 80 ntBASIC-0.26□□□□□ -2.45
RORAP35398 AC044792.1-201ENST00000593294 196 ntBASIC-0.26□□□□□ -2.45
RORAP35398 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
RORAP35398 U6.104-201ENST00000637979 90 ntBASIC-0.26□□□□□ -2.45
RORAP35398 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.27□□□□□ -2.45
RORAP35398 RNU6-429P-201ENST00000384582 108 ntBASIC-0.27□□□□□ -2.45
RORAP35398 AC104692.1-201ENST00000472406 90 ntBASIC-0.27□□□□□ -2.45
RORAP35398 MTND1P19-201ENST00000511780 315 ntBASIC-0.27□□□□□ -2.45
RORAP35398 MIR4677-201ENST00000584153 80 ntBASIC-0.27□□□□□ -2.45
RORAP35398 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.28□□□□□ -2.45
RORAP35398 RNU6-690P-201ENST00000365242 106 ntBASIC-0.28□□□□□ -2.45
RORAP35398 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.28□□□□□ -2.45
RORAP35398 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.28□□□□□ -2.45
RORAP35398 RNA5SP163-201ENST00000410304 99 ntBASIC-0.28□□□□□ -2.45
RORAP35398 MTND2P23-201ENST00000422990 651 ntBASIC-0.28□□□□□ -2.45
RORAP35398 SNORD127-201ENST00000458892 86 ntBASIC-0.28□□□□□ -2.45
RORAP35398 TRAJ51-201ENST00000504127 63 ntBASIC-0.28□□□□□ -2.45
RORAP35398 MIR548H5-201ENST00000580314 60 ntBASIC-0.28□□□□□ -2.45
RORAP35398 U7.6-201ENST00000610841 64 ntBASIC-0.28□□□□□ -2.45
RORAP35398 U6.106-201ENST00000636360 105 ntBASIC-0.28□□□□□ -2.45
RORAP35398 RNU6-449P-201ENST00000383914 107 ntBASIC-0.29□□□□□ -2.46
RORAP35398 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
RORAP35398 SNORD58.1-201ENST00000391313 66 ntBASIC-0.29□□□□□ -2.46
RORAP35398 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.29□□□□□ -2.46
RORAP35398 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.29□□□□□ -2.46
RORAP35398 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.3□□□□□ -2.46
RORAP35398 RNU6-768P-201ENST00000384683 107 ntBASIC-0.3□□□□□ -2.46
RORAP35398 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.3□□□□□ -2.46
RORAP35398 MIR1912-201ENST00000410389 80 ntBASIC-0.3□□□□□ -2.46
RORAP35398 RNU6-240P-201ENST00000516098 97 ntBASIC-0.3□□□□□ -2.46
RORAP35398 RNU6-180P-201ENST00000516697 61 ntBASIC-0.3□□□□□ -2.46
RORAP35398 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.31□□□□□ -2.46
RORAP35398 HMGN2P22-201ENST00000427588 175 ntBASIC-0.31□□□□□ -2.46
RORAP35398 RNA5SP395-201ENST00000516567 118 ntBASIC-0.31□□□□□ -2.46
RORAP35398 IGLVI-20-201ENST00000519296 130 ntBASIC-0.31□□□□□ -2.46
RORAP35398 AL117187.1-201ENST00000555482 181 ntBASIC-0.31□□□□□ -2.46
RORAP35398 MIR3149-201ENST00000584629 83 ntBASIC-0.31□□□□□ -2.46
RORAP35398 AC073869.9-201ENST00000641610 120 ntBASIC-0.31□□□□□ -2.46
RORAP35398 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.32□□□□□ -2.46
RORAP35398 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.32□□□□□ -2.46
RORAP35398 MIR599-201ENST00000385069 95 ntBASIC-0.32□□□□□ -2.46
RORAP35398 MIR548H3-201ENST00000408771 118 ntBASIC-0.32□□□□□ -2.46
RORAP35398 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.32□□□□□ -2.46
RORAP35398 AC011603.4-201ENST00000611325 277 ntBASIC-0.32□□□□□ -2.46
RORAP35398 SNORD27-201ENST00000363981 72 ntBASIC-0.33□□□□□ -2.46
RORAP35398 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.33□□□□□ -2.46
RORAP35398 MIR206-201ENST00000384872 86 ntBASIC-0.33□□□□□ -2.46
RORAP35398 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.33□□□□□ -2.46
RORAP35398 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.33□□□□□ -2.46
RORAP35398 AC097635.1-201ENST00000450678 155 ntBASIC-0.33□□□□□ -2.46
RORAP35398 RNU7-123P-201ENST00000515911 60 ntBASIC-0.33□□□□□ -2.46
RORAP35398 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.34□□□□□ -2.46
RORAP35398 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.34□□□□□ -2.46
RORAP35398 RNU6-865P-201ENST00000364772 107 ntBASIC-0.34□□□□□ -2.46
RORAP35398 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.34□□□□□ -2.46
RORAP35398 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.34□□□□□ -2.46
RORAP35398 MIR635-201ENST00000384830 98 ntBASIC-0.34□□□□□ -2.46
RORAP35398 RNU4-69P-201ENST00000410677 143 ntBASIC-0.34□□□□□ -2.46
RORAP35398 BX276092.1-201ENST00000427368 251 ntBASIC-0.34□□□□□ -2.46
RORAP35398 RNA5SP484-201ENST00000458857 111 ntBASIC-0.34□□□□□ -2.46
RORAP35398 AC138907.4-201ENST00000570107 226 ntBASIC-0.34□□□□□ -2.46
RORAP35398 MIR4500-201ENST00000579472 76 ntBASIC-0.34□□□□□ -2.46
RORAP35398 AC021443.1-201ENST00000604478 211 ntBASIC-0.34□□□□□ -2.46
RORAP35398 RNU7-10P-201ENST00000607194 63 ntBASIC-0.34□□□□□ -2.46
RORAP35398 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.35□□□□□ -2.47
RORAP35398 RNU6-508P-201ENST00000363231 103 ntBASIC-0.35□□□□□ -2.47
RORAP35398 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.35□□□□□ -2.47
RORAP35398 RNU6-35P-201ENST00000384530 107 ntBASIC-0.35□□□□□ -2.47
RORAP35398 RNU6-918P-201ENST00000391219 106 ntBASIC-0.35□□□□□ -2.47
RORAP35398 RNU7-48P-201ENST00000458875 63 ntBASIC-0.35□□□□□ -2.47
RORAP35398 RNU7-164P-201ENST00000459221 62 ntBASIC-0.35□□□□□ -2.47
RORAP35398 NAMPTP3-201ENST00000569273 224 ntBASIC-0.35□□□□□ -2.47
RORAP35398 MIR5589-201ENST00000579442 60 ntBASIC-0.35□□□□□ -2.47
RORAP35398 MIR4802-201ENST00000581881 80 ntBASIC-0.35□□□□□ -2.47
RORAP35398 MIR6514-201ENST00000622549 70 ntBASIC-0.35□□□□□ -2.47
RORAP35398 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.36□□□□□ -2.47
RORAP35398 RNY1P11-201ENST00000363759 113 ntBASIC-0.36□□□□□ -2.47
RORAP35398 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.36□□□□□ -2.47
RORAP35398 SNORA75.1-201ENST00000391130 148 ntBASIC-0.36□□□□□ -2.47
RORAP35398 MIR876-201ENST00000401147 81 ntBASIC-0.36□□□□□ -2.47
RORAP35398 SNORD110-201ENST00000408189 75 ntBASIC-0.36□□□□□ -2.47
RORAP35398 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.36□□□□□ -2.47
RORAP35398 MIR3920-201ENST00000581751 86 ntBASIC-0.36□□□□□ -2.47
RORAP35398 MIR4636-201ENST00000582271 80 ntBASIC-0.36□□□□□ -2.47
RORAP35398 AL670379.3-201ENST00000605040 251 ntBASIC-0.36□□□□□ -2.47
RORAP35398 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
RORAP35398 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.37□□□□□ -2.47
RORAP35398 RNU6-818P-201ENST00000364837 108 ntBASIC-0.37□□□□□ -2.47
RORAP35398 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.37□□□□□ -2.47
RORAP35398 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.37□□□□□ -2.47
RORAP35398 MIR606-201ENST00000384851 96 ntBASIC-0.37□□□□□ -2.47
RORAP35398 MIR106A-201ENST00000384870 81 ntBASIC-0.37□□□□□ -2.47
RORAP35398 MIR519A1-201ENST00000385257 85 ntBASIC-0.37□□□□□ -2.47
RORAP35398 AC006210.1-201ENST00000424882 111 ntBASIC-0.37□□□□□ -2.47
RORAP35398 SNORD4A-201ENST00000459174 72 ntBASIC-0.37□□□□□ -2.47
RORAP35398 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.37□□□□□ -2.47
RORAP35398 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
RORAP35398 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.37□□□□□ -2.47
RORAP35398 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms