Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SNORA20.3-201ENST00000516880 132 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 SNORD58B-201ENST00000607313 66 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 AC093783.1-201ENST00000612976 329 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 AL138825.1-201ENST00000618587 192 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 AC104985.2-201ENST00000620598 500 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 AL606534.2-204ENST00000635008 178 ntBASIC-1.03□□□□□ -2.57
CD40LGP29965 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 SNORD115-23-201ENST00000364461 82 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 SNORD114-17-201ENST00000364699 75 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CD40LGP29965 AL731563.1-201ENST00000442202 214 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 snoU13.19-201ENST00000459148 104 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 AC084781.2-201ENST00000615568 161 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 MTND4LP32-201ENST00000636111 270 ntBASIC-1.04□□□□□ -2.58
CD40LGP29965 RNU4-90P-201ENST00000362773 141 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 SNORD115-20-201ENST00000365099 82 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 RNU6-337P-201ENST00000391243 106 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 RNU7-113P-201ENST00000459273 62 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 RNU6-720P-201ENST00000516363 108 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 SCARNA15-202ENST00000516881 127 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 AC026421.1-201ENST00000519101 163 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 MIR376A1-201ENST00000616574 68 ntBASIC-1.05□□□□□ -2.58
CD40LGP29965 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 RNU4-24P-201ENST00000364565 139 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 MIR548I2-201ENST00000408348 149 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 RNA5SP144-201ENST00000410846 116 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 AL161932.1-201ENST00000437408 146 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 RNU6-479P-201ENST00000516348 105 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 MIR548AE2-201ENST00000583456 67 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 AL365205.2-201ENST00000594586 68 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 AC113139.1-201ENST00000605049 239 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 AC025253.1-201ENST00000613623 543 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 U6.100-201ENST00000636230 99 ntBASIC-1.06□□□□□ -2.58
CD40LGP29965 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 RNA5SP192-201ENST00000364404 120 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 SNORD81.2-201ENST00000365153 76 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 RNU6-30P-201ENST00000384561 107 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 RNU6-570P-201ENST00000517051 105 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 AC068339.1-201ENST00000526965 141 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 AL442663.2-201ENST00000554385 511 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 MIR4464-201ENST00000580818 92 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 AC084782.3-201ENST00000612282 578 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.07□□□□□ -2.58
CD40LGP29965 RNU6-170P-201ENST00000362832 104 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 SNORD115-46-201ENST00000390982 71 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 AL606845.1-201ENST00000404881 255 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 SNORD18.2-201ENST00000459604 70 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.08□□□□□ -2.58
CD40LGP29965 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.08□□□□□ -2.58
CD40LGP29965 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 SNORD116-2-201ENST00000384274 95 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 SNORD116-29-201ENST00000384516 83 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 SNORD116-6-201ENST00000384711 96 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 MIR516A2-201ENST00000384888 90 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 MIR516A1-201ENST00000385033 90 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 MIR124-2-201ENST00000385081 109 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 RNU6-588P-201ENST00000410281 105 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 RNU2-51P-201ENST00000410708 197 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.09□□□□□ -2.58
CD40LGP29965 MTND4LP30-201ENST00000454092 297 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 AC082651.2-201ENST00000496833 166 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 RNU6-453P-201ENST00000516819 85 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 snoU83B.1-201ENST00000517136 88 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 MIR548O2-201ENST00000616090 70 ntBASIC-1.09□□□□□ -2.58
CD40LGP29965 SNORA25.1-201ENST00000362326 128 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 RNU1-115P-201ENST00000365329 160 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 MIR206-201ENST00000384872 86 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 RNY4P36-201ENST00000391116 96 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 RNU7-48P-201ENST00000458875 63 ntBASIC-1.1□□□□□ -2.59
CD40LGP29965 AC026407.1-201ENST00000518369 204 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms