Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
CDH3P22223 AC092628.1-201ENST00000436250 252 ntBASIC0.5□□□□□ -2.33
CDH3P22223 Y_RNA.692-201ENST00000516627 105 ntBASIC0.5□□□□□ -2.33
CDH3P22223 AC243829.3-201ENST00000622177 108 ntBASIC0.5□□□□□ -2.33
CDH3P22223 AP001340.1-201ENST00000624405 217 ntBASIC0.5□□□□□ -2.33
CDH3P22223 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CDH3P22223 Y_RNA.170-201ENST00000363746 110 ntBASIC0.49□□□□□ -2.33
CDH3P22223 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
CDH3P22223 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
CDH3P22223 Y_RNA.464-201ENST00000384282 110 ntBASIC0.49□□□□□ -2.33
CDH3P22223 RNU6-1212P-201ENST00000517023 104 ntBASIC0.49□□□□□ -2.33
CDH3P22223 AP001328.1-201ENST00000528550 176 ntBASIC0.49□□□□□ -2.33
CDH3P22223 MTND5P34-201ENST00000568888 325 ntBASIC0.49□□□□□ -2.33
CDH3P22223 MIR1273G-201ENST00000577677 100 ntBASIC0.49□□□□□ -2.33
CDH3P22223 MIR3678-201ENST00000578455 94 ntBASIC0.49□□□□□ -2.33
CDH3P22223 uc_338.16-201ENST00000621804 95 ntBASIC0.49□□□□□ -2.33
CDH3P22223 MIR924-201ENST00000638017 53 ntBASIC0.49□□□□□ -2.33
CDH3P22223 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
CDH3P22223 Y_RNA.32-201ENST00000362589 110 ntBASIC0.48□□□□□ -2.33
CDH3P22223 Y_RNA.114-201ENST00000363265 113 ntBASIC0.48□□□□□ -2.33
CDH3P22223 RNA5SP133-201ENST00000363368 119 ntBASIC0.48□□□□□ -2.33
CDH3P22223 SNORD114-10-201ENST00000363409 72 ntBASIC0.48□□□□□ -2.33
CDH3P22223 Y_RNA.280-201ENST00000364765 112 ntBASIC0.48□□□□□ -2.33
CDH3P22223 Y_RNA.294-201ENST00000364916 102 ntBASIC0.48□□□□□ -2.33
CDH3P22223 Y_RNA.299-201ENST00000364973 94 ntBASIC0.48□□□□□ -2.33
CDH3P22223 RNU6-291P-201ENST00000384720 107 ntBASIC0.48□□□□□ -2.33
CDH3P22223 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.48□□□□□ -2.33
CDH3P22223 RNU6-531P-201ENST00000516694 104 ntBASIC0.48□□□□□ -2.33
CDH3P22223 RNA5SP94-201ENST00000516917 108 ntBASIC0.48□□□□□ -2.33
CDH3P22223 AC138749.4-201ENST00000563970 127 ntBASIC0.48□□□□□ -2.33
CDH3P22223 AC105081.1-201ENST00000617727 106 ntBASIC0.48□□□□□ -2.33
CDH3P22223 U6.109-201ENST00000636749 87 ntBASIC0.48□□□□□ -2.33
CDH3P22223 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.47□□□□□ -2.33
CDH3P22223 RNY1P4-201ENST00000384595 115 ntBASIC0.47□□□□□ -2.33
CDH3P22223 Y_RNA.536-201ENST00000384621 113 ntBASIC0.47□□□□□ -2.33
CDH3P22223 MIR644A-201ENST00000385262 94 ntBASIC0.47□□□□□ -2.33
CDH3P22223 RNU6-679P-201ENST00000391003 106 ntBASIC0.47□□□□□ -2.33
CDH3P22223 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CDH3P22223 RNA5SP272-201ENST00000516095 111 ntBASIC0.47□□□□□ -2.33
CDH3P22223 RNU7-200P-201ENST00000516105 62 ntBASIC0.47□□□□□ -2.33
CDH3P22223 SNORA31.14-201ENST00000516728 116 ntBASIC0.47□□□□□ -2.33
CDH3P22223 RNA5SP517-201ENST00000364724 117 ntBASIC0.46□□□□□ -2.34
CDH3P22223 RNU6-907P-201ENST00000390924 102 ntBASIC0.46□□□□□ -2.34
CDH3P22223 RN7SKP12-201ENST00000516275 143 ntBASIC0.46□□□□□ -2.34
CDH3P22223 RNU6-426P-201ENST00000516464 97 ntBASIC0.46□□□□□ -2.34
CDH3P22223 Y_RNA.697-201ENST00000516776 113 ntBASIC0.46□□□□□ -2.34
CDH3P22223 RNU6-255P-201ENST00000516957 105 ntBASIC0.46□□□□□ -2.34
CDH3P22223 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CDH3P22223 MT-TI-201ENST00000387365 69 ntBASIC0.45□□□□□ -2.34
CDH3P22223 RNU6-1194P-201ENST00000516208 104 ntBASIC0.45□□□□□ -2.34
CDH3P22223 DEFB131E-201ENST00000532329 154 ntBASIC0.45□□□□□ -2.34
CDH3P22223 MIR4711-201ENST00000578274 70 ntBASIC0.45□□□□□ -2.34
CDH3P22223 AC092634.7-201ENST00000621022 103 ntBASIC0.45□□□□□ -2.34
CDH3P22223 RNU4-58P-201ENST00000363192 141 ntBASIC0.44□□□□□ -2.34
CDH3P22223 RNA5SP457-201ENST00000363657 124 ntBASIC0.44□□□□□ -2.34
CDH3P22223 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
CDH3P22223 Y_RNA.488-201ENST00000384403 102 ntBASIC0.44□□□□□ -2.34
CDH3P22223 RNU6-535P-201ENST00000384722 107 ntBASIC0.44□□□□□ -2.34
CDH3P22223 MIR206-201ENST00000384872 86 ntBASIC0.44□□□□□ -2.34
CDH3P22223 RNU6-1321P-201ENST00000390905 107 ntBASIC0.44□□□□□ -2.34
CDH3P22223 RNU6-1307P-201ENST00000391012 103 ntBASIC0.44□□□□□ -2.34
CDH3P22223 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
CDH3P22223 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
CDH3P22223 RN7SKP19-201ENST00000516016 252 ntBASIC0.44□□□□□ -2.34
CDH3P22223 MIR3668-201ENST00000582138 75 ntBASIC0.44□□□□□ -2.34
CDH3P22223 U7.2-201ENST00000607576 63 ntBASIC0.44□□□□□ -2.34
CDH3P22223 MIR6779-201ENST00000617283 64 ntBASIC0.44□□□□□ -2.34
CDH3P22223 Y_RNA.85-201ENST00000363014 111 ntBASIC0.43□□□□□ -2.34
CDH3P22223 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
CDH3P22223 RNU6-647P-201ENST00000364243 107 ntBASIC0.43□□□□□ -2.34
CDH3P22223 RNY1P2-201ENST00000364820 117 ntBASIC0.43□□□□□ -2.34
CDH3P22223 Y_RNA.506-201ENST00000384494 102 ntBASIC0.43□□□□□ -2.34
CDH3P22223 Y_RNA.567-201ENST00000384736 106 ntBASIC0.43□□□□□ -2.34
CDH3P22223 SNORD77B-201ENST00000391112 67 ntBASIC0.43□□□□□ -2.34
CDH3P22223 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
CDH3P22223 RNA5SP245-201ENST00000364239 121 ntBASIC0.42□□□□□ -2.34
CDH3P22223 RNU6-616P-201ENST00000384353 107 ntBASIC0.42□□□□□ -2.34
CDH3P22223 MIR548I1-201ENST00000408810 149 ntBASIC0.42□□□□□ -2.34
CDH3P22223 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
CDH3P22223 AL158147.1-201ENST00000443970 75 ntBASIC0.42□□□□□ -2.34
CDH3P22223 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
CDH3P22223 Y_RNA.448-201ENST00000384185 108 ntBASIC0.41□□□□□ -2.34
CDH3P22223 SNORA8.2-201ENST00000384372 139 ntBASIC0.41□□□□□ -2.34
CDH3P22223 SNORA40.8-201ENST00000411034 126 ntBASIC0.41□□□□□ -2.34
CDH3P22223 SNORA62.5-201ENST00000516634 120 ntBASIC0.41□□□□□ -2.34
CDH3P22223 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
CDH3P22223 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
CDH3P22223 AC087741.2-201ENST00000619415 172 ntBASIC0.41□□□□□ -2.34
CDH3P22223 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.35
CDH3P22223 Y_RNA.205-201ENST00000364128 113 ntBASIC0.4□□□□□ -2.35
CDH3P22223 RNY1P5-201ENST00000383890 115 ntBASIC0.4□□□□□ -2.35
CDH3P22223 MIR518A1-201ENST00000385068 85 ntBASIC0.4□□□□□ -2.35
CDH3P22223 MIR1263-201ENST00000408324 86 ntBASIC0.4□□□□□ -2.35
CDH3P22223 MTND4LP9-201ENST00000427694 174 ntBASIC0.4□□□□□ -2.35
CDH3P22223 RNU7-48P-201ENST00000458875 63 ntBASIC0.4□□□□□ -2.35
CDH3P22223 RNU7-2P-201ENST00000516096 62 ntBASIC0.4□□□□□ -2.35
CDH3P22223 RNU6-346P-201ENST00000516288 111 ntBASIC0.4□□□□□ -2.35
CDH3P22223 RNU6-781P-201ENST00000516377 101 ntBASIC0.4□□□□□ -2.35
CDH3P22223 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CDH3P22223 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms