Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NID1P14543 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
NID1P14543 Y_RNA.386-201ENST00000383913 105 ntBASIC2.17□□□□□ -2.06
NID1P14543 MIR154-201ENST00000385243 84 ntBASIC2.17□□□□□ -2.06
NID1P14543 SNORD90-201ENST00000391145 111 ntBASIC2.17□□□□□ -2.06
NID1P14543 AL161935.2-201ENST00000414627 60 ntBASIC2.17□□□□□ -2.06
NID1P14543 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
NID1P14543 RPL30P7-201ENST00000479312 323 ntBASIC2.17□□□□□ -2.06
NID1P14543 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
NID1P14543 RNU6-1194P-201ENST00000516208 104 ntBASIC2.17□□□□□ -2.06
NID1P14543 SNORA25.16-201ENST00000516741 121 ntBASIC2.17□□□□□ -2.06
NID1P14543 RNA5SP402-201ENST00000517148 110 ntBASIC2.17□□□□□ -2.06
NID1P14543 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
NID1P14543 MIR4491-201ENST00000581087 68 ntBASIC2.17□□□□□ -2.06
NID1P14543 Y_RNA.205-201ENST00000364128 113 ntBASIC2.16□□□□□ -2.06
NID1P14543 SNORA8.1-201ENST00000384250 140 ntBASIC2.16□□□□□ -2.06
NID1P14543 RNU6-1241P-201ENST00000384536 107 ntBASIC2.16□□□□□ -2.06
NID1P14543 RNU6-540P-201ENST00000384622 101 ntBASIC2.16□□□□□ -2.06
NID1P14543 AL137847.3-201ENST00000611521 109 ntBASIC2.16□□□□□ -2.06
NID1P14543 MIR6895-201ENST00000613497 78 ntBASIC2.16□□□□□ -2.06
NID1P14543 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NID1P14543 RNA5SP99-201ENST00000364020 114 ntBASIC2.15□□□□□ -2.07
NID1P14543 RNU6-800P-201ENST00000384473 103 ntBASIC2.15□□□□□ -2.07
NID1P14543 SNORD93-201ENST00000408813 74 ntBASIC2.15□□□□□ -2.07
NID1P14543 JTBP1-201ENST00000441314 247 ntBASIC2.15□□□□□ -2.07
NID1P14543 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
NID1P14543 GHRLOS.1-201ENST00000610995 70 ntBASIC2.15□□□□□ -2.07
NID1P14543 uc_338.6-201ENST00000613544 171 ntBASIC2.15□□□□□ -2.07
NID1P14543 U6.111-201ENST00000636093 83 ntBASIC2.15□□□□□ -2.07
NID1P14543 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.15□□□□□ -2.07
NID1P14543 MIR377-201ENST00000362145 69 ntBASIC2.14□□□□□ -2.07
NID1P14543 Y_RNA.588-201ENST00000391254 102 ntBASIC2.14□□□□□ -2.07
NID1P14543 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NID1P14543 MIR101-2-201ENST00000362195 79 ntBASIC2.13□□□□□ -2.07
NID1P14543 Y_RNA.36-201ENST00000362602 112 ntBASIC2.13□□□□□ -2.07
NID1P14543 RNY4P3-201ENST00000365254 95 ntBASIC2.13□□□□□ -2.07
NID1P14543 RNU6-1051P-201ENST00000365471 102 ntBASIC2.13□□□□□ -2.07
NID1P14543 MIR144-201ENST00000384886 86 ntBASIC2.13□□□□□ -2.07
NID1P14543 SNORD100-201ENST00000408573 76 ntBASIC2.13□□□□□ -2.07
NID1P14543 RNA5SP425-201ENST00000410336 112 ntBASIC2.13□□□□□ -2.07
NID1P14543 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
NID1P14543 AL591806.2-201ENST00000433122 173 ntBASIC2.13□□□□□ -2.07
NID1P14543 snoU13.17-201ENST00000458802 104 ntBASIC2.13□□□□□ -2.07
NID1P14543 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
NID1P14543 RNU7-10P-201ENST00000607194 63 ntBASIC2.13□□□□□ -2.07
NID1P14543 AC046143.2-201ENST00000609789 160 ntBASIC2.13□□□□□ -2.07
NID1P14543 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.13□□□□□ -2.07
NID1P14543 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.13□□□□□ -2.07
NID1P14543 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
NID1P14543 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NID1P14543 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.12□□□□□ -2.07
NID1P14543 Y_RNA.42-201ENST00000362660 108 ntBASIC2.12□□□□□ -2.07
NID1P14543 RNU6-403P-201ENST00000363163 104 ntBASIC2.12□□□□□ -2.07
NID1P14543 SNORA3A-201ENST00000364113 130 ntBASIC2.12□□□□□ -2.07
NID1P14543 Y_RNA.239-201ENST00000364444 113 ntBASIC2.12□□□□□ -2.07
NID1P14543 Y_RNA.536-201ENST00000384621 113 ntBASIC2.12□□□□□ -2.07
NID1P14543 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
NID1P14543 RNU6-663P-201ENST00000391105 106 ntBASIC2.12□□□□□ -2.07
NID1P14543 MIR942-201ENST00000401111 86 ntBASIC2.12□□□□□ -2.07
NID1P14543 RNU7-195P-201ENST00000458793 62 ntBASIC2.12□□□□□ -2.07
NID1P14543 SNORA31.11-201ENST00000516528 139 ntBASIC2.12□□□□□ -2.07
NID1P14543 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
NID1P14543 RNU11-2P-201ENST00000516898 142 ntBASIC2.12□□□□□ -2.07
NID1P14543 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
NID1P14543 MIR6516-201ENST00000630554 81 ntBASIC2.12□□□□□ -2.07
NID1P14543 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NID1P14543 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NID1P14543 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NID1P14543 RNU1-36P-201ENST00000365130 165 ntBASIC2.11□□□□□ -2.07
NID1P14543 RPS27P16-201ENST00000425758 201 ntBASIC2.11□□□□□ -2.07
NID1P14543 MIR18B-201ENST00000454574 71 ntBASIC2.11□□□□□ -2.07
NID1P14543 snoU13.23-201ENST00000458863 104 ntBASIC2.11□□□□□ -2.07
NID1P14543 TRAJ51-201ENST00000504127 63 ntBASIC2.11□□□□□ -2.07
NID1P14543 RNU6-947P-201ENST00000516264 106 ntBASIC2.11□□□□□ -2.07
NID1P14543 RNU6-250P-201ENST00000516958 103 ntBASIC2.11□□□□□ -2.07
NID1P14543 AC015712.3-201ENST00000559380 164 ntBASIC2.11□□□□□ -2.07
NID1P14543 MIR548H5-201ENST00000580314 60 ntBASIC2.11□□□□□ -2.07
NID1P14543 TRDV1-202ENST00000621643 102 ntBASIC2.11□□□□□ -2.07
NID1P14543 Y_RNA.207-201ENST00000364142 106 ntBASIC2.1□□□□□ -2.07
NID1P14543 MIR519A1-201ENST00000385257 85 ntBASIC2.1□□□□□ -2.07
NID1P14543 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
NID1P14543 MIR103A2-201ENST00000362154 78 ntBASIC2.09□□□□□ -2.07
NID1P14543 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
NID1P14543 SNORD115-31-201ENST00000365318 82 ntBASIC2.09□□□□□ -2.07
NID1P14543 Y_RNA.371-201ENST00000365591 113 ntBASIC2.09□□□□□ -2.07
NID1P14543 RNU6-471P-201ENST00000383944 106 ntBASIC2.09□□□□□ -2.07
NID1P14543 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
NID1P14543 RNU6-154P-201ENST00000384306 106 ntBASIC2.09□□□□□ -2.07
NID1P14543 U8.13-201ENST00000390842 128 ntBASIC2.09□□□□□ -2.07
NID1P14543 snoU13.25-201ENST00000458945 104 ntBASIC2.09□□□□□ -2.07
NID1P14543 AL133373.1-201ENST00000497098 94 ntBASIC2.09□□□□□ -2.07
NID1P14543 Y_RNA.809-201ENST00000516058 95 ntBASIC2.09□□□□□ -2.07
NID1P14543 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
NID1P14543 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
NID1P14543 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
NID1P14543 RNU6-330P-201ENST00000363015 107 ntBASIC2.08□□□□□ -2.08
NID1P14543 RNU6-340P-201ENST00000364005 107 ntBASIC2.08□□□□□ -2.08
NID1P14543 RNU6-681P-201ENST00000364012 104 ntBASIC2.08□□□□□ -2.08
NID1P14543 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
NID1P14543 MIR1185-1-201ENST00000408598 86 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms