Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNY4P28-201ENST00000365281 93 ntBASIC-0.31□□□□□ -2.46
CD28P10747 SNORA32-201ENST00000384072 121 ntBASIC-0.31□□□□□ -2.46
CD28P10747 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.31□□□□□ -2.46
CD28P10747 MIR519A1-201ENST00000385257 85 ntBASIC-0.31□□□□□ -2.46
CD28P10747 SNORA75.1-201ENST00000391130 148 ntBASIC-0.31□□□□□ -2.46
CD28P10747 MIR1302-6-201ENST00000408466 90 ntBASIC-0.31□□□□□ -2.46
CD28P10747 AC109327.2-201ENST00000448339 378 ntBASIC-0.31□□□□□ -2.46
CD28P10747 AC097635.1-201ENST00000450678 155 ntBASIC-0.31□□□□□ -2.46
CD28P10747 RNU2-60P-201ENST00000517290 128 ntBASIC-0.31□□□□□ -2.46
CD28P10747 MIR4645-201ENST00000583158 77 ntBASIC-0.31□□□□□ -2.46
CD28P10747 AC006504.6-201ENST00000590142 199 ntBASIC-0.31□□□□□ -2.46
CD28P10747 AL356055.1-201ENST00000602528 446 ntBASIC-0.31□□□□□ -2.46
CD28P10747 MIR148A-201ENST00000362215 68 ntBASIC-0.32□□□□□ -2.46
CD28P10747 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.32□□□□□ -2.46
CD28P10747 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.32□□□□□ -2.46
CD28P10747 MTND4LP11-201ENST00000422184 280 ntBASIC-0.32□□□□□ -2.46
CD28P10747 HAR1A.1-201ENST00000459583 118 ntBASIC-0.32□□□□□ -2.46
CD28P10747 MTND1P19-201ENST00000511780 315 ntBASIC-0.32□□□□□ -2.46
CD28P10747 RNU2-35P-201ENST00000516446 142 ntBASIC-0.32□□□□□ -2.46
CD28P10747 CR383656.4-201ENST00000546909 122 ntBASIC-0.32□□□□□ -2.46
CD28P10747 AC105081.1-201ENST00000617727 106 ntBASIC-0.32□□□□□ -2.46
CD28P10747 RNA5SP98-201ENST00000363158 137 ntBASIC-0.33□□□□□ -2.46
CD28P10747 RNU6-275P-201ENST00000364910 107 ntBASIC-0.33□□□□□ -2.46
CD28P10747 SNORD58.1-201ENST00000391313 66 ntBASIC-0.33□□□□□ -2.46
CD28P10747 MIR548F4-201ENST00000408515 105 ntBASIC-0.33□□□□□ -2.46
CD28P10747 HMGN2P22-201ENST00000427588 175 ntBASIC-0.33□□□□□ -2.46
CD28P10747 TRAJ51-201ENST00000504127 63 ntBASIC-0.33□□□□□ -2.46
CD28P10747 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.33□□□□□ -2.46
CD28P10747 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.33□□□□□ -2.46
CD28P10747 RNU2-4P-201ENST00000606190 192 ntBASIC-0.33□□□□□ -2.46
CD28P10747 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.34□□□□□ -2.46
CD28P10747 SNORD114-28-201ENST00000363610 72 ntBASIC-0.34□□□□□ -2.46
CD28P10747 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.34□□□□□ -2.46
CD28P10747 RNY3P16-201ENST00000516338 101 ntBASIC-0.34□□□□□ -2.46
CD28P10747 RNU6-635P-201ENST00000516651 102 ntBASIC-0.34□□□□□ -2.46
CD28P10747 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
CD28P10747 AP001094.1-201ENST00000579805 193 ntBASIC-0.34□□□□□ -2.46
CD28P10747 RNU6-509P-201ENST00000363519 107 ntBASIC-0.35□□□□□ -2.47
CD28P10747 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.35□□□□□ -2.47
CD28P10747 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR635-201ENST00000384830 98 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR599-201ENST00000385069 95 ntBASIC-0.35□□□□□ -2.47
CD28P10747 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR548I2-201ENST00000408348 149 ntBASIC-0.35□□□□□ -2.47
CD28P10747 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.35□□□□□ -2.47
CD28P10747 AL117351.2-201ENST00000513571 157 ntBASIC-0.35□□□□□ -2.47
CD28P10747 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.35□□□□□ -2.47
CD28P10747 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.35□□□□□ -2.47
CD28P10747 MIR4308-201ENST00000580634 81 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR3149-201ENST00000584629 83 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR6514-201ENST00000622549 70 ntBASIC-0.35□□□□□ -2.47
CD28P10747 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.36□□□□□ -2.47
CD28P10747 RNU6-690P-201ENST00000365242 106 ntBASIC-0.36□□□□□ -2.47
CD28P10747 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.36□□□□□ -2.47
CD28P10747 RNU6-493P-201ENST00000391321 108 ntBASIC-0.36□□□□□ -2.47
CD28P10747 SNORD110-201ENST00000408189 75 ntBASIC-0.36□□□□□ -2.47
CD28P10747 RNU4-69P-201ENST00000410677 143 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.36□□□□□ -2.47
CD28P10747 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.37□□□□□ -2.47
CD28P10747 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.37□□□□□ -2.47
CD28P10747 MIR548H3-201ENST00000408771 118 ntBASIC-0.37□□□□□ -2.47
CD28P10747 AC006210.1-201ENST00000424882 111 ntBASIC-0.37□□□□□ -2.47
CD28P10747 RNU7-48P-201ENST00000458875 63 ntBASIC-0.37□□□□□ -2.47
CD28P10747 SNORA25.13-201ENST00000516395 103 ntBASIC-0.37□□□□□ -2.47
CD28P10747 MIR3920-201ENST00000581751 86 ntBASIC-0.37□□□□□ -2.47
CD28P10747 AL670379.3-201ENST00000605040 251 ntBASIC-0.37□□□□□ -2.47
CD28P10747 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
CD28P10747 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.38□□□□□ -2.47
CD28P10747 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.38□□□□□ -2.47
CD28P10747 RNU6-865P-201ENST00000364772 107 ntBASIC-0.38□□□□□ -2.47
CD28P10747 RNU6-867P-201ENST00000364956 107 ntBASIC-0.38□□□□□ -2.47
CD28P10747 SNORD114-12-201ENST00000365400 75 ntBASIC-0.38□□□□□ -2.47
CD28P10747 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.38□□□□□ -2.47
CD28P10747 MIR206-201ENST00000384872 86 ntBASIC-0.38□□□□□ -2.47
CD28P10747 RNA5SP484-201ENST00000458857 111 ntBASIC-0.38□□□□□ -2.47
CD28P10747 RNU6-758P-201ENST00000516292 89 ntBASIC-0.38□□□□□ -2.47
CD28P10747 NAMPTP3-201ENST00000569273 224 ntBASIC-0.38□□□□□ -2.47
CD28P10747 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.39□□□□□ -2.47
CD28P10747 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.39□□□□□ -2.47
CD28P10747 MIR106A-201ENST00000384870 81 ntBASIC-0.39□□□□□ -2.47
CD28P10747 MIR604-201ENST00000384880 94 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Z95118.1-201ENST00000421372 247 ntBASIC-0.39□□□□□ -2.47
CD28P10747 BX276092.1-201ENST00000427368 251 ntBASIC-0.39□□□□□ -2.47
CD28P10747 MTATP8P1-201ENST00000467115 207 ntBASIC-0.39□□□□□ -2.47
CD28P10747 RNU7-123P-201ENST00000515911 60 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.39□□□□□ -2.47
CD28P10747 AC044792.1-201ENST00000593294 196 ntBASIC-0.39□□□□□ -2.47
CD28P10747 AC021443.1-201ENST00000604478 211 ntBASIC-0.39□□□□□ -2.47
CD28P10747 AP001362.1-201ENST00000625165 124 ntBASIC-0.39□□□□□ -2.47
CD28P10747 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.4□□□□□ -2.47
CD28P10747 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.4□□□□□ -2.47
CD28P10747 RNU6-768P-201ENST00000384683 107 ntBASIC-0.4□□□□□ -2.47
CD28P10747 RNA5SP300-201ENST00000391197 107 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms