Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 RNU4-69P-201ENST00000410677 143 ntBASIC0.28□□□□□ -2.36
LINGO3P0C6S8 SUMO1P3-201ENST00000439961 304 ntBASIC0.28□□□□□ -2.36
LINGO3P0C6S8 AC138749.4-201ENST00000563970 127 ntBASIC0.28□□□□□ -2.36
LINGO3P0C6S8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.28□□□□□ -2.36
LINGO3P0C6S8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.251-201ENST00000364551 99 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.298-201ENST00000364960 107 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 RNU4-11P-201ENST00000365287 132 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.366-201ENST00000365540 102 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.27□□□□□ -2.37
LINGO3P0C6S8 AC098479.1-201ENST00000609225 154 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 AC004792.1-201ENST00000614523 137 ntBASIC0.27□□□□□ -2.37
LINGO3P0C6S8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
LINGO3P0C6S8 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 SNORD28-201ENST00000384706 75 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 RNA5SP47-201ENST00000517230 109 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 PVT1_3.1-201ENST00000620853 95 ntBASIC0.26□□□□□ -2.37
LINGO3P0C6S8 RNU6-151P-201ENST00000364158 107 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 RNA5SP245-201ENST00000364239 121 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 SNORD77B-201ENST00000391112 67 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 RNU2-59P-201ENST00000410482 191 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 AC074198.2-201ENST00000508153 258 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 AL137067.1-201ENST00000615933 120 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 AC091304.10-201ENST00000641554 121 ntBASIC0.25□□□□□ -2.37
LINGO3P0C6S8 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 SNORA63.5-201ENST00000363548 123 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.785-201ENST00000384290 109 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 MIR1270-201ENST00000459320 83 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 MIR7107-201ENST00000611489 80 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 MIR7111-201ENST00000619751 72 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 MIR6828-201ENST00000636181 60 ntBASIC0.24□□□□□ -2.37
LINGO3P0C6S8 RNY1P2-201ENST00000364820 117 ntBASIC0.23□□□□□ -2.37
LINGO3P0C6S8 RNU6-449P-201ENST00000383914 107 ntBASIC0.23□□□□□ -2.37
LINGO3P0C6S8 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
LINGO3P0C6S8 RNY4P20-201ENST00000516678 93 ntBASIC0.23□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.778-201ENST00000620203 90 ntBASIC0.23□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.56-201ENST00000362798 112 ntBASIC0.22□□□□□ -2.37
LINGO3P0C6S8 MIR613-201ENST00000385248 95 ntBASIC0.22□□□□□ -2.37
LINGO3P0C6S8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.22□□□□□ -2.37
LINGO3P0C6S8 AC108081.1-201ENST00000604358 221 ntBASIC0.22□□□□□ -2.37
LINGO3P0C6S8 Y_RNA.49-201ENST00000362714 112 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 RNU6-429P-201ENST00000384582 108 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 MIR206-201ENST00000384872 86 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 MIR513C-201ENST00000401352 84 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 RN7SL793P-201ENST00000583259 296 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 TUG1_4.1-201ENST00000619464 181 ntBASIC0.21□□□□□ -2.38
LINGO3P0C6S8 SNORD116-18-201ENST00000383961 92 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.448-201ENST00000384185 108 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 RNY1P4-201ENST00000384595 115 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 RNU6-460P-201ENST00000391158 108 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 RNU6-182P-201ENST00000516970 105 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 MIR548H5-201ENST00000580314 60 ntBASIC0.2□□□□□ -2.38
LINGO3P0C6S8 RNU6-915P-201ENST00000364943 103 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 RNU6-1130P-201ENST00000365434 107 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 RNU7-197P-201ENST00000458836 62 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 RNU7-48P-201ENST00000458875 63 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.692-201ENST00000516627 105 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 AC138869.1-201ENST00000568623 124 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 MIR4500-201ENST00000579472 76 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 AC010487.4-201ENST00000637027 61 ntBASIC0.19□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.36-201ENST00000362602 112 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.98-201ENST00000363109 102 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 SNORD115-24-201ENST00000363528 82 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 MIR3121-201ENST00000579680 77 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
LINGO3P0C6S8 RNU6-716P-201ENST00000365621 103 ntBASIC0.17□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.580-201ENST00000391004 95 ntBASIC0.17□□□□□ -2.38
LINGO3P0C6S8 RNU7-2P-201ENST00000516096 62 ntBASIC0.17□□□□□ -2.38
LINGO3P0C6S8 RNU7-10P-201ENST00000607194 63 ntBASIC0.17□□□□□ -2.38
LINGO3P0C6S8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.16□□□□□ -2.38
LINGO3P0C6S8 Y_RNA.8-201ENST00000362353 102 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 RNU6-865P-201ENST00000364772 107 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 RNU6-187P-201ENST00000384139 106 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 RNU6-616P-201ENST00000384353 107 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 PCNPP3-201ENST00000393579 471 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 MIR548L-201ENST00000408303 86 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 RNU6-394P-201ENST00000410735 107 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 AC244505.6-201ENST00000452829 130 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
LINGO3P0C6S8 RNU6-1126P-201ENST00000384002 107 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 MIR635-201ENST00000384830 98 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 MIR193B-201ENST00000384907 83 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 MIR6755-201ENST00000619993 66 ntBASIC0.15□□□□□ -2.39
LINGO3P0C6S8 AP001362.1-201ENST00000625165 124 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms