Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC087499.7-201ENST00000441958 109 ntBASIC1.36□□□□□ -2.19
SNRPA1P09661 SNORD79.1-201ENST00000516069 84 ntBASIC1.36□□□□□ -2.19
SNRPA1P09661 SNORA70.22-201ENST00000517160 124 ntBASIC1.36□□□□□ -2.19
SNRPA1P09661 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SNRPA1P09661 MIR34C-201ENST00000384831 77 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 MIR590-201ENST00000385008 97 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 MT-TF-201ENST00000387314 71 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 SNORD83.1-201ENST00000411362 77 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 SNORD114-21-201ENST00000606412 72 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 RMST_2.1-201ENST00000617263 136 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 AC012676.2-201ENST00000619258 186 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 AC008163.1-202ENST00000636004 2889 ntBASIC1.35□□□□□ -2.19
SNRPA1P09661 RNU6-1099P-201ENST00000363533 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-865P-201ENST00000364772 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-1201P-201ENST00000384227 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 UBL5P1-201ENST00000507979 193 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNA5SP220-201ENST00000516298 104 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-109P-201ENST00000516364 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-184P-201ENST00000516514 107 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 AC133485.1-201ENST00000567176 124 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 MIR4694-201ENST00000578534 80 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 AL078603.1-201ENST00000603824 313 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 MIR376B-201ENST00000614515 100 ntBASIC1.34□□□□□ -2.19
SNRPA1P09661 RNU6-1313P-201ENST00000362622 102 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNY3P2-201ENST00000362918 102 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-832P-201ENST00000363319 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-32P-201ENST00000383948 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-42P-201ENST00000384165 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-13P-201ENST00000384248 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 Y_RNA.495-201ENST00000384435 112 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-12P-201ENST00000384604 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-41P-201ENST00000384741 107 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU7-48P-201ENST00000458875 63 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU7-90P-201ENST00000459216 62 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 RNU6-904P-201ENST00000516206 101 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 DEFB131E-201ENST00000532329 154 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 AC106800.4-201ENST00000614905 153 ntBASIC1.33□□□□□ -2.2
SNRPA1P09661 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SNRPA1P09661 Y_RNA.247-201ENST00000364500 92 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 RNU6-1113P-201ENST00000384348 107 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 RNA5SP89-201ENST00000410300 108 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 AC096949.1-201ENST00000412047 152 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 MIR18B-201ENST00000454574 71 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 RNU6-168P-201ENST00000516189 101 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 RNU6-1018P-201ENST00000516577 106 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 U6.109-201ENST00000636749 87 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 AC023934.1-201ENST00000574529 2389 ntBASIC1.32□□□□□ -2.2
SNRPA1P09661 MIR373-201ENST00000362273 69 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 Y_RNA.78-201ENST00000362970 110 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU4-36P-201ENST00000364294 144 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 SNORD111-201ENST00000408139 94 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 SNORD93-201ENST00000408813 74 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 RNU6-537P-201ENST00000517277 103 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 AL442128.1-201ENST00000615151 90 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
SNRPA1P09661 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.31□□□□□ -2.2
SNRPA1P09661 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SNRPA1P09661 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
SNRPA1P09661 Y_RNA.98-201ENST00000363109 102 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 RNU6-934P-201ENST00000365154 107 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 SNORA25-201ENST00000384384 134 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 RPS29P28-201ENST00000446439 141 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 MIR4771-2-201ENST00000577758 74 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 MIR4771-1-201ENST00000582617 74 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.3□□□□□ -2.2
SNRPA1P09661 RNA5SP133-201ENST00000363368 119 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU4-38P-201ENST00000364472 129 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU1-36P-201ENST00000365130 165 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SNRPA1P09661 MIR1257-201ENST00000408490 117 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU6-994P-201ENST00000410507 111 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU7-185P-201ENST00000459215 60 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU6-1006P-201ENST00000516998 103 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 MIR6788-201ENST00000618842 66 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
SNRPA1P09661 RNU6-403P-201ENST00000363163 104 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 Y_RNA.377-201ENST00000365644 108 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 AC002429.1-201ENST00000437672 148 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 Y_RNA.659-201ENST00000515994 113 ntBASIC1.28□□□□□ -2.2
SNRPA1P09661 RNU6-795P-201ENST00000516323 103 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms