Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC087499.7-201ENST00000441958 109 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 AC036111.3-201ENST00000526389 112 ntBASIC1.12□□□□□ -2.23
HOXC6P09630 Y_RNA.36-201ENST00000362602 112 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 Y_RNA.49-201ENST00000362714 112 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 Y_RNA.309-201ENST00000365046 111 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 RNU6-147P-201ENST00000383983 107 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 MT-TN-201ENST00000387400 73 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HOXC6P09630 RNU7-137P-201ENST00000516788 62 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
HOXC6P09630 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
HOXC6P09630 Y_RNA.163-201ENST00000363702 113 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 SNORD115-35-201ENST00000365122 82 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 Y_RNA.323-201ENST00000365157 109 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 RNU6-409P-201ENST00000384114 104 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 RNU6-1321P-201ENST00000390905 107 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 U8.15-201ENST00000390947 134 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 SNORD83.1-201ENST00000411362 77 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 RNU7-21P-201ENST00000459430 62 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 SNORD79.1-201ENST00000516069 84 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 RNU7-2P-201ENST00000516096 62 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 MIR3613-201ENST00000579844 87 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 RNU6-94P-201ENST00000607728 107 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
HOXC6P09630 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
HOXC6P09630 RNU6-949P-201ENST00000384040 107 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 Y_RNA.448-201ENST00000384185 108 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 Y_RNA.507-201ENST00000384500 99 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 MIR618-201ENST00000385287 98 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 MIR1912-201ENST00000410389 80 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 RNU6-733P-201ENST00000410759 104 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 UBL5P1-201ENST00000507979 193 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
HOXC6P09630 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.09□□□□□ -2.23
HOXC6P09630 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
HOXC6P09630 Y_RNA.168-201ENST00000363740 102 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 SNORD113.3-201ENST00000364630 78 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 Y_RNA.360-201ENST00000365512 102 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 SNORA51.5-201ENST00000384126 131 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 MIR577-201ENST00000385196 96 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 MIR1302-5-201ENST00000408164 150 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 AC096949.1-201ENST00000412047 152 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 MTATP6P29-201ENST00000415057 132 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
HOXC6P09630 RNU6-109P-201ENST00000516364 107 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 RNU6-184P-201ENST00000516514 107 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 AC141557.1-201ENST00000540982 400 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 AL512310.12-203ENST00000640543 90 ntBASIC1.08□□□□□ -2.24
HOXC6P09630 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
HOXC6P09630 SNORD114-10-201ENST00000363409 72 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 Y_RNA.247-201ENST00000364500 92 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 RNU6-756P-201ENST00000383997 107 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 MIR34C-201ENST00000384831 77 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 MIR590-201ENST00000385008 97 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 AL031737.1-201ENST00000450125 223 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 MIR376B-201ENST00000614515 100 ntBASIC1.07□□□□□ -2.24
HOXC6P09630 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
HOXC6P09630 MIR377-201ENST00000362145 69 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 RNU6-1099P-201ENST00000363533 107 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 RNU6-934P-201ENST00000365154 107 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 Y_RNA.328-201ENST00000365208 113 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 AC002429.1-201ENST00000437672 148 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 AC106800.4-201ENST00000614905 153 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 AC012676.2-201ENST00000619258 186 ntBASIC1.06□□□□□ -2.24
HOXC6P09630 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXC6P09630 AC023934.1-201ENST00000574529 2389 ntBASIC1.05□□□□□ -2.24
HOXC6P09630 SNORD93-201ENST00000408813 74 ntBASIC1.05□□□□□ -2.24
HOXC6P09630 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.05□□□□□ -2.24
HOXC6P09630 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
HOXC6P09630 AC020891.4-201ENST00000605745 93 ntBASIC1.05□□□□□ -2.24
HOXC6P09630 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.05□□□□□ -2.24
HOXC6P09630 RNA5SP325-201ENST00000363756 130 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 SNORA25-201ENST00000384384 134 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 SNORD111-201ENST00000408139 94 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 MIR18B-201ENST00000454574 71 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXC6P09630 RNU7-48P-201ENST00000458875 63 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 DEFB131E-201ENST00000532329 154 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 AC138749.4-201ENST00000563970 127 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 MIR4771-2-201ENST00000577758 74 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 MIR4491-201ENST00000581087 68 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 MIR4771-1-201ENST00000582617 74 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 MIR548Z-201ENST00000584743 97 ntBASIC1.04□□□□□ -2.24
HOXC6P09630 RNU6-766P-201ENST00000362478 107 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNY3P2-201ENST00000362918 102 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNU6-832P-201ENST00000363319 107 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNU6-865P-201ENST00000364772 107 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNU6-1201P-201ENST00000384227 107 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 MT-TF-201ENST00000387314 71 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNA5SP89-201ENST00000410300 108 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNU7-185P-201ENST00000459215 60 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 RNU6-537P-201ENST00000517277 103 ntBASIC1.03□□□□□ -2.24
HOXC6P09630 AC133485.1-201ENST00000567176 124 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 306.6 ms