Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 SNORD92-201ENST00000585078 85 ntBASIC0.72□□□□□ -2.29
RAF1P04049 AC025166.1-201ENST00000612411 163 ntBASIC0.72□□□□□ -2.29
RAF1P04049 AC087741.2-201ENST00000619415 172 ntBASIC0.72□□□□□ -2.29
RAF1P04049 RNU6-959P-201ENST00000384671 107 ntBASIC0.71□□□□□ -2.3
RAF1P04049 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
RAF1P04049 RNU4-83P-201ENST00000410863 133 ntBASIC0.71□□□□□ -2.3
RAF1P04049 RNU7-6P-201ENST00000516845 62 ntBASIC0.71□□□□□ -2.3
RAF1P04049 MIR3910-1-201ENST00000580936 111 ntBASIC0.71□□□□□ -2.3
RAF1P04049 MIR4491-201ENST00000581087 68 ntBASIC0.71□□□□□ -2.3
RAF1P04049 MIR3163-201ENST00000581592 73 ntBASIC0.71□□□□□ -2.3
RAF1P04049 AC008608.1-201ENST00000603910 127 ntBASIC0.71□□□□□ -2.3
RAF1P04049 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.71□□□□□ -2.3
RAF1P04049 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.71□□□□□ -2.3
RAF1P04049 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
RAF1P04049 MTND5P18-201ENST00000445624 1801 ntBASIC0.71□□□□□ -2.3
RAF1P04049 SNORD114-10-201ENST00000363409 72 ntBASIC0.7□□□□□ -2.3
RAF1P04049 Y_RNA.213-201ENST00000364178 111 ntBASIC0.7□□□□□ -2.3
RAF1P04049 RNU6-364P-201ENST00000384387 107 ntBASIC0.7□□□□□ -2.3
RAF1P04049 RNU7-102P-201ENST00000458948 62 ntBASIC0.7□□□□□ -2.3
RAF1P04049 RNU6-659P-201ENST00000516454 104 ntBASIC0.7□□□□□ -2.3
RAF1P04049 MIR8066-201ENST00000617280 78 ntBASIC0.7□□□□□ -2.3
RAF1P04049 AC105081.1-201ENST00000617727 106 ntBASIC0.7□□□□□ -2.3
RAF1P04049 AL157777.2-201ENST00000258070 137 ntBASIC0.69□□□□□ -2.3
RAF1P04049 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-403P-201ENST00000363163 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-616P-201ENST00000384353 107 ntBASIC0.69□□□□□ -2.3
RAF1P04049 MIR759-201ENST00000390224 91 ntBASIC0.69□□□□□ -2.3
RAF1P04049 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-447P-201ENST00000410293 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-1118P-201ENST00000410382 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-1076P-201ENST00000410397 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-355P-201ENST00000410427 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-791P-201ENST00000410467 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-705P-201ENST00000410601 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-1100P-201ENST00000410691 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-860P-201ENST00000410860 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-1217P-201ENST00000411276 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 RNU6-785P-201ENST00000411324 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 Y_RNA.712-201ENST00000517011 92 ntBASIC0.69□□□□□ -2.3
RAF1P04049 Y_RNA.773-201ENST00000607168 90 ntBASIC0.69□□□□□ -2.3
RAF1P04049 U6.90-201ENST00000614007 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 U6.70-201ENST00000620287 104 ntBASIC0.69□□□□□ -2.3
RAF1P04049 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
RAF1P04049 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RAF1P04049 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.69□□□□□ -2.3
RAF1P04049 Y_RNA.13-201ENST00000362403 112 ntBASIC0.68□□□□□ -2.3
RAF1P04049 Y_RNA.30-201ENST00000362572 97 ntBASIC0.68□□□□□ -2.3
RAF1P04049 SNORD116-14-201ENST00000383894 92 ntBASIC0.68□□□□□ -2.3
RAF1P04049 SNORD116-17-201ENST00000383929 92 ntBASIC0.68□□□□□ -2.3
RAF1P04049 SNORD116-15-201ENST00000384445 92 ntBASIC0.68□□□□□ -2.3
RAF1P04049 SNORD116-19-201ENST00000384729 92 ntBASIC0.68□□□□□ -2.3
RAF1P04049 MIR206-201ENST00000384872 86 ntBASIC0.68□□□□□ -2.3
RAF1P04049 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
RAF1P04049 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.68□□□□□ -2.3
RAF1P04049 MIR6082-201ENST00000613604 109 ntBASIC0.68□□□□□ -2.3
RAF1P04049 AC010487.4-201ENST00000637027 61 ntBASIC0.68□□□□□ -2.3
RAF1P04049 MIR3914-2-201ENST00000637339 95 ntBASIC0.68□□□□□ -2.3
RAF1P04049 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
RAF1P04049 SNORD115-19-201ENST00000363098 82 ntBASIC0.67□□□□□ -2.3
RAF1P04049 SNORD115-18-201ENST00000363293 82 ntBASIC0.67□□□□□ -2.3
RAF1P04049 RNA5SP457-201ENST00000363657 124 ntBASIC0.67□□□□□ -2.3
RAF1P04049 SNORD115-17-201ENST00000364612 82 ntBASIC0.67□□□□□ -2.3
RAF1P04049 Y_RNA.346-201ENST00000365385 112 ntBASIC0.67□□□□□ -2.3
RAF1P04049 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
RAF1P04049 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
RAF1P04049 RNU6-1321P-201ENST00000390905 107 ntBASIC0.67□□□□□ -2.3
RAF1P04049 RNU6-1307P-201ENST00000391012 103 ntBASIC0.67□□□□□ -2.3
RAF1P04049 MIR936-201ENST00000401264 98 ntBASIC0.67□□□□□ -2.3
RAF1P04049 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
RAF1P04049 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
RAF1P04049 SNORA25.16-201ENST00000516741 121 ntBASIC0.67□□□□□ -2.3
RAF1P04049 AC138749.4-201ENST00000563970 127 ntBASIC0.67□□□□□ -2.3
RAF1P04049 AC090897.1-201ENST00000580909 226 ntBASIC0.67□□□□□ -2.3
RAF1P04049 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
RAF1P04049 RNA5SP133-201ENST00000363368 119 ntBASIC0.66□□□□□ -2.3
RAF1P04049 Y_RNA.127-201ENST00000363386 109 ntBASIC0.66□□□□□ -2.3
RAF1P04049 SNORA72.6-201ENST00000384520 129 ntBASIC0.66□□□□□ -2.3
RAF1P04049 MIR548D2-201ENST00000384955 97 ntBASIC0.66□□□□□ -2.3
RAF1P04049 MIR573-201ENST00000384964 99 ntBASIC0.66□□□□□ -2.3
RAF1P04049 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
RAF1P04049 RNU7-2P-201ENST00000516096 62 ntBASIC0.66□□□□□ -2.3
RAF1P04049 RNU6-1333P-201ENST00000516162 93 ntBASIC0.66□□□□□ -2.3
RAF1P04049 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
RAF1P04049 MIR1255B1-201ENST00000636325 63 ntBASIC0.66□□□□□ -2.3
RAF1P04049 MIR924-201ENST00000638017 53 ntBASIC0.66□□□□□ -2.3
RAF1P04049 Y_RNA.261-201ENST00000364631 102 ntBASIC0.65□□□□□ -2.31
RAF1P04049 SNORD115-35-201ENST00000365122 82 ntBASIC0.65□□□□□ -2.31
RAF1P04049 Y_RNA.448-201ENST00000384185 108 ntBASIC0.65□□□□□ -2.31
RAF1P04049 U6.109-201ENST00000636749 87 ntBASIC0.65□□□□□ -2.31
RAF1P04049 AC132825.6-201ENST00000638861 357 ntBASIC0.65□□□□□ -2.31
RAF1P04049 RNY4P6-201ENST00000363667 96 ntBASIC0.64□□□□□ -2.31
RAF1P04049 RNY1P2-201ENST00000364820 117 ntBASIC0.64□□□□□ -2.31
RAF1P04049 Y_RNA.344-201ENST00000365381 112 ntBASIC0.64□□□□□ -2.31
RAF1P04049 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
RAF1P04049 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
RAF1P04049 SNORD33.1-201ENST00000516213 88 ntBASIC0.64□□□□□ -2.31
RAF1P04049 RNU6-531P-201ENST00000516694 104 ntBASIC0.64□□□□□ -2.31
RAF1P04049 RNU6-765P-201ENST00000516916 99 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms