Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MIR337-201ENST00000362281 93 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 RNU1-17P-201ENST00000363022 152 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 Y_RNA.363-201ENST00000365529 113 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 MIR583-201ENST00000384846 75 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 SNORA40.18-201ENST00000391200 128 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 Y_RNA.593-201ENST00000410292 98 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 RNU6-295P-201ENST00000516901 104 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 AC133485.1-201ENST00000567176 124 ntBASIC1.44□□□□□ -2.18
SCAF4O95104 Y_RNA.96-201ENST00000363092 109 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 SNORD58A-201ENST00000383875 65 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 Y_RNA.567-201ENST00000384736 106 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 MT-TF-201ENST00000387314 71 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 AC003989.2-201ENST00000440224 169 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.43□□□□□ -2.18
SCAF4O95104 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.43□□□□□ -2.18
SCAF4O95104 RNU6-90P-201ENST00000606352 106 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 AC103810.7-201ENST00000607821 91 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 AC012676.2-201ENST00000619258 186 ntBASIC1.43□□□□□ -2.18
SCAF4O95104 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.43□□□□□ -2.18
SCAF4O95104 AC008163.1-202ENST00000636004 2889 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 RNY1P10-201ENST00000363268 113 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 SNORA26.2-201ENST00000390922 122 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 SPINT5P-201ENST00000448174 155 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 snoU13.21-201ENST00000459368 105 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 AC090897.1-201ENST00000580909 226 ntBASIC1.42□□□□□ -2.18
SCAF4O95104 Y_RNA.17-201ENST00000362433 111 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 RNU6-1134P-201ENST00000365156 101 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 SNORA2B-201ENST00000384583 137 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 RN7SKP88-201ENST00000516847 250 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 7SK.8-201ENST00000612110 250 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 7SK.11-201ENST00000615477 250 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 7SK.13-201ENST00000622040 250 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 U6.109-201ENST00000636749 87 ntBASIC1.41□□□□□ -2.18
SCAF4O95104 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SCAF4O95104 RNA5SP133-201ENST00000363368 119 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 SNORD38.2-201ENST00000384470 69 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 MIR450A2-201ENST00000385022 100 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 Y_RNA.588-201ENST00000391254 102 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 MIR18B-201ENST00000454574 71 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 RNA5SP182-201ENST00000516064 82 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.4□□□□□ -2.19
SCAF4O95104 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
SCAF4O95104 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
SCAF4O95104 Y_RNA.119-201ENST00000363301 96 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 SNORD116-10-201ENST00000363791 102 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 MIR499A-201ENST00000384903 122 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 MIR489-201ENST00000384923 84 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 AC108667.1-201ENST00000428618 249 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 SNRPGP12-201ENST00000449481 213 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 RN7SKP12-201ENST00000516275 143 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 AC036111.3-201ENST00000526389 112 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 MTND5P40-201ENST00000559945 246 ntBASIC1.39□□□□□ -2.19
SCAF4O95104 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
SCAF4O95104 MIR9-3-201ENST00000385084 90 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 SNORA26.9-201ENST00000391322 122 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 RNU4-83P-201ENST00000410863 133 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
SCAF4O95104 MIR4500-201ENST00000579472 76 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 MIR4491-201ENST00000581087 68 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.38□□□□□ -2.19
SCAF4O95104 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 RNU6-219P-201ENST00000364728 107 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 SNORA25.9-201ENST00000365087 128 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 RNU1-36P-201ENST00000365130 165 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 RNU6-675P-201ENST00000384236 104 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 RNU6-820P-201ENST00000384273 107 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 MIR181B2-201ENST00000385004 89 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 MIR6845-201ENST00000613182 61 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 AC025521.1-201ENST00000621624 286 ntBASIC1.37□□□□□ -2.19
SCAF4O95104 MIR494-201ENST00000349529 81 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 SNORD113.3-201ENST00000364630 78 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 Y_RNA.330-201ENST00000365230 109 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 RNU6-1152P-201ENST00000384576 107 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 U8.13-201ENST00000390842 128 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 RNU6-402P-201ENST00000410678 103 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 RNU6-592P-201ENST00000411333 103 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 RNU6-267P-201ENST00000516714 103 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 SNORA25.16-201ENST00000516741 121 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 AL513043.2-201ENST00000573941 143 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 MIR8081-201ENST00000611533 95 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 AC084768.2-201ENST00000622736 221 ntBASIC1.36□□□□□ -2.19
SCAF4O95104 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SCAF4O95104 RNA5SP173-201ENST00000364857 136 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 MIR518E-201ENST00000385252 88 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 SNORD93-201ENST00000408813 74 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 SNORD83.1-201ENST00000411362 77 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 BX276092.1-201ENST00000427368 251 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 RNU7-185P-201ENST00000459215 60 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 RNU7-21P-201ENST00000459430 62 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 RNU6-850P-201ENST00000516934 103 ntBASIC1.35□□□□□ -2.19
SCAF4O95104 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms