Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MIR2909-201ENST00000617113 69 ntBASIC0.25□□□□□ -2.37
TRAF3IP2O43734 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAF3IP2O43734 RNU4-58P-201ENST00000363192 141 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 RNU6-1099P-201ENST00000363533 107 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 RNU7-164P-201ENST00000459221 62 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.651-201ENST00000459380 103 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 SNORA31.14-201ENST00000516728 116 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 SNORA25.16-201ENST00000516741 121 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.697-201ENST00000516776 113 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 RNU7-137P-201ENST00000516788 62 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 AC022523.2-201ENST00000561045 150 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 MIR4639-201ENST00000584938 69 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 MIR6828-201ENST00000636181 60 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 MIR3658-201ENST00000636291 56 ntBASIC0.24□□□□□ -2.37
TRAF3IP2O43734 SNORA36.1-201ENST00000363424 132 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.272-201ENST00000364696 102 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 MIRLET7F2-201ENST00000385277 83 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.681-201ENST00000516445 113 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 SCARNA16.5-201ENST00000517114 183 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.23□□□□□ -2.37
TRAF3IP2O43734 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
TRAF3IP2O43734 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNA5SP133-201ENST00000363368 119 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.298-201ENST00000364960 107 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 SNORA32-201ENST00000384072 121 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNU6-535P-201ENST00000384722 107 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 MIR644A-201ENST00000385262 94 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.580-201ENST00000391004 95 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNU4-69P-201ENST00000410677 143 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNU7-123P-201ENST00000515911 60 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 Y_RNA.690-201ENST00000516603 95 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 AC112693.2-201ENST00000556538 232 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 AC004792.1-201ENST00000614523 137 ntBASIC0.22□□□□□ -2.37
TRAF3IP2O43734 RNU6-1229P-201ENST00000364295 107 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 RNY1P2-201ENST00000364820 117 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.366-201ENST00000365540 102 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 SNORD67.1-201ENST00000516618 108 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 RNA5SP268-201ENST00000516828 124 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 RNA5SP47-201ENST00000517230 109 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 DEFB131E-201ENST00000532329 154 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 AC138749.4-201ENST00000563970 127 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 MTND5P34-201ENST00000568888 325 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 SNORA25.18-201ENST00000607153 114 ntBASIC0.21□□□□□ -2.38
TRAF3IP2O43734 RNU4-67P-201ENST00000364569 141 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 SNORD28-201ENST00000384706 75 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 RNU7-197P-201ENST00000458836 62 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 RNU6-531P-201ENST00000516694 104 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 AL359881.1-201ENST00000602916 267 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 U6.109-201ENST00000636749 87 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 AC091304.10-201ENST00000641554 121 ntBASIC0.2□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.56-201ENST00000362798 112 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNY1P11-201ENST00000363759 113 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-309P-201ENST00000364573 106 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU4-11P-201ENST00000365287 132 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 SNORD77B-201ENST00000391112 67 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 MIR1270-201ENST00000459320 83 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-848P-201ENST00000515948 107 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-617P-201ENST00000516147 107 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-473P-201ENST00000516164 107 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-1049P-201ENST00000516414 107 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.686-201ENST00000516548 134 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 RNU6-182P-201ENST00000516970 105 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 AL137067.1-201ENST00000615933 120 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.778-201ENST00000620203 90 ntBASIC0.19□□□□□ -2.38
TRAF3IP2O43734 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 MIR101-2-201ENST00000362195 79 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.119-201ENST00000363301 96 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 RNU6-449P-201ENST00000383914 107 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 RNU6-429P-201ENST00000384582 108 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 AC244505.6-201ENST00000452829 130 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 RNU7-10P-201ENST00000607194 63 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 MIR7107-201ENST00000611489 80 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
TRAF3IP2O43734 Y_RNA.68-201ENST00000362881 102 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 RNU6-1126P-201ENST00000384002 107 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 RNU6-394P-201ENST00000410735 107 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 RNA5SP227-201ENST00000516184 113 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 RNY4P20-201ENST00000516678 93 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 MIR548H5-201ENST00000580314 60 ntBASIC0.17□□□□□ -2.38
TRAF3IP2O43734 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 RNU6-151P-201ENST00000364158 107 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 SUMO1P3-201ENST00000439961 304 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 AC244669.1-204ENST00000621564 178 ntBASIC0.16□□□□□ -2.38
TRAF3IP2O43734 RNU6-508P-201ENST00000363231 103 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 MIR206-201ENST00000384872 86 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 RNU6-1321P-201ENST00000390905 107 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 MIR513C-201ENST00000401352 84 ntBASIC0.15□□□□□ -2.39
TRAF3IP2O43734 RNU7-48P-201ENST00000458875 63 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms