Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 MIR3121-201ENST00000579680 77 ntBASIC0.45□□□□□ -2.34
XRCC3O43542 AC108081.1-201ENST00000604358 221 ntBASIC0.45□□□□□ -2.34
XRCC3O43542 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
XRCC3O43542 RNA5SP517-201ENST00000364724 117 ntBASIC0.44□□□□□ -2.34
XRCC3O43542 Y_RNA.692-201ENST00000516627 105 ntBASIC0.44□□□□□ -2.34
XRCC3O43542 AL359881.1-201ENST00000602916 267 ntBASIC0.44□□□□□ -2.34
XRCC3O43542 AC098479.1-201ENST00000609225 154 ntBASIC0.44□□□□□ -2.34
XRCC3O43542 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
XRCC3O43542 Y_RNA.32-201ENST00000362589 110 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 RNU4-58P-201ENST00000363192 141 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 RNA5SP133-201ENST00000363368 119 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 Y_RNA.400-201ENST00000383963 111 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 RNU6-291P-201ENST00000384720 107 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 MIR644A-201ENST00000385262 94 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
XRCC3O43542 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.43□□□□□ -2.34
XRCC3O43542 RNU6-469P-201ENST00000516253 101 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 SNORA31.14-201ENST00000516728 116 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 Y_RNA.697-201ENST00000516776 113 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 DEFB131E-201ENST00000532329 154 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 AC138749.4-201ENST00000563970 127 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 MTND5P34-201ENST00000568888 325 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 MIR548X2-201ENST00000579776 100 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 AP001340.1-201ENST00000624405 217 ntBASIC0.43□□□□□ -2.34
XRCC3O43542 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
XRCC3O43542 Y_RNA.8-201ENST00000362353 102 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNU6-915P-201ENST00000364943 103 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 Y_RNA.398-201ENST00000383952 99 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNU6-535P-201ENST00000384722 107 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 MIR518A1-201ENST00000385068 85 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNU5E-3P-201ENST00000515913 68 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 SNORA25.12-201ENST00000516202 82 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNY4P20-201ENST00000516678 93 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNU6-531P-201ENST00000516694 104 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNU6-135P-201ENST00000516769 101 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 RNA5SP330-201ENST00000517096 96 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 U6.109-201ENST00000636749 87 ntBASIC0.42□□□□□ -2.34
XRCC3O43542 Y_RNA.85-201ENST00000363014 111 ntBASIC0.41□□□□□ -2.34
XRCC3O43542 Y_RNA.555-201ENST00000384673 110 ntBASIC0.41□□□□□ -2.34
XRCC3O43542 MIR8087-201ENST00000612745 78 ntBASIC0.41□□□□□ -2.34
XRCC3O43542 RNY1P2-201ENST00000364820 117 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 SNORA8.2-201ENST00000384372 139 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 RNU6-1104P-201ENST00000384723 104 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 Y_RNA.567-201ENST00000384736 106 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 SNORD71-201ENST00000411292 86 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 AC108059.2-201ENST00000434626 151 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 AP001328.1-201ENST00000528550 176 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 AC022523.2-201ENST00000561045 150 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 AC105081.1-201ENST00000617727 106 ntBASIC0.4□□□□□ -2.35
XRCC3O43542 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
XRCC3O43542 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 Y_RNA.119-201ENST00000363301 96 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 SNORA36.1-201ENST00000363424 132 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 SNORD118-201ENST00000363593 134 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 RNA5SP457-201ENST00000363657 124 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 Y_RNA.215-201ENST00000364204 112 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 SNORD77B-201ENST00000391112 67 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 MIR1197-201ENST00000408818 88 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 MIR3671-201ENST00000580455 88 ntBASIC0.39□□□□□ -2.35
XRCC3O43542 Y_RNA.114-201ENST00000363265 113 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 Y_RNA.180-201ENST00000363867 113 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 Y_RNA.420-201ENST00000384043 110 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 MIR569-201ENST00000385228 96 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 MIRLET7F2-201ENST00000385277 83 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 MTND5P41-201ENST00000517498 206 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 IGKV1-22-201ENST00000524313 326 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 AL109933.3-201ENST00000619095 188 ntBASIC0.38□□□□□ -2.35
XRCC3O43542 Y_RNA.56-201ENST00000362798 112 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 Y_RNA.258-201ENST00000364613 105 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 Y_RNA.464-201ENST00000384282 110 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 MIR206-201ENST00000384872 86 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 RNU6-1321P-201ENST00000390905 107 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 MIR4639-201ENST00000584938 69 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 AC021753.1-201ENST00000635724 168 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 MIR6828-201ENST00000636181 60 ntBASIC0.37□□□□□ -2.35
XRCC3O43542 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 MIR101-2-201ENST00000362195 79 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNA5SP62-201ENST00000363457 110 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNA5SP499-201ENST00000363982 119 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNU6-647P-201ENST00000364243 107 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 Y_RNA.280-201ENST00000364765 112 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNU6-429P-201ENST00000384582 108 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 SNORD28-201ENST00000384706 75 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 AC092628.1-201ENST00000436250 252 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNU7-48P-201ENST00000458875 63 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 SNORA25.18-201ENST00000607153 114 ntBASIC0.36□□□□□ -2.35
XRCC3O43542 RNA5SP245-201ENST00000364239 121 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 RN7SKP19-201ENST00000516016 252 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 RNU7-2P-201ENST00000516096 62 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 RNU6-1212P-201ENST00000517023 104 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 SCARNA16.5-201ENST00000517114 183 ntBASIC0.35□□□□□ -2.35
XRCC3O43542 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms