Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SCARNA16.5-201ENST00000517114 183 ntBASIC0.3□□□□□ -2.36
AP3D1O14617 RNA5SP47-201ENST00000517230 109 ntBASIC0.3□□□□□ -2.36
AP3D1O14617 MIR4639-201ENST00000584938 69 ntBASIC0.3□□□□□ -2.36
AP3D1O14617 RNU6-508P-201ENST00000363231 103 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 RNA5SP133-201ENST00000363368 119 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 Y_RNA.280-201ENST00000364765 112 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 RNU4-11P-201ENST00000365287 132 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 MIRLET7F2-201ENST00000385277 83 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 RNA5SP268-201ENST00000516828 124 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 RNU6-182P-201ENST00000516970 105 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 MIR3121-201ENST00000579680 77 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 MIR6515-201ENST00000619843 57 ntBASIC0.29□□□□□ -2.36
AP3D1O14617 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 RNU6-449P-201ENST00000383914 107 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 SNORD28-201ENST00000384706 75 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 RNU6-531P-201ENST00000516694 104 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.28□□□□□ -2.36
AP3D1O14617 AC108081.1-201ENST00000604358 221 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 AP001340.1-201ENST00000624405 217 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 U6.109-201ENST00000636749 87 ntBASIC0.28□□□□□ -2.36
AP3D1O14617 Y_RNA.56-201ENST00000362798 112 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-429P-201ENST00000384582 108 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 AC244505.6-201ENST00000452829 130 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 snoU13.18-201ENST00000459483 104 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-848P-201ENST00000515948 107 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-617P-201ENST00000516147 107 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-473P-201ENST00000516164 107 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-1049P-201ENST00000516414 107 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 AL137067.1-201ENST00000615933 120 ntBASIC0.27□□□□□ -2.37
AP3D1O14617 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
AP3D1O14617 RNU6-1130P-201ENST00000365434 107 ntBASIC0.26□□□□□ -2.37
AP3D1O14617 RNU2-59P-201ENST00000410482 191 ntBASIC0.26□□□□□ -2.37
AP3D1O14617 RNY4P20-201ENST00000516678 93 ntBASIC0.26□□□□□ -2.37
AP3D1O14617 DEFB131E-201ENST00000532329 154 ntBASIC0.26□□□□□ -2.37
AP3D1O14617 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.26□□□□□ -2.37
AP3D1O14617 Y_RNA.119-201ENST00000363301 96 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 RNU6-151P-201ENST00000364158 107 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 RNU6-1229P-201ENST00000364295 107 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 Y_RNA.355-201ENST00000365462 98 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 RNU6-886P-201ENST00000384319 105 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 RNU6-794P-201ENST00000517261 64 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 MIR7107-201ENST00000611489 80 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 AC091304.10-201ENST00000641554 121 ntBASIC0.25□□□□□ -2.37
AP3D1O14617 Y_RNA.508-201ENST00000384502 114 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 MIR206-201ENST00000384872 86 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 RNU6-1321P-201ENST00000390905 107 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 SUMO1P3-201ENST00000439961 304 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 Y_RNA.692-201ENST00000516627 105 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 MIR3144-201ENST00000579460 79 ntBASIC0.24□□□□□ -2.37
AP3D1O14617 RNA5SP245-201ENST00000364239 121 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 RNU6-915P-201ENST00000364943 103 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 RNU6-1126P-201ENST00000384002 107 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 Y_RNA.555-201ENST00000384673 110 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 RNU6-1104P-201ENST00000384723 104 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 MIR598-201ENST00000384868 97 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 SNORD77B-201ENST00000391112 67 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 RNU6-460P-201ENST00000391158 108 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 IGKV1-22-201ENST00000524313 326 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 MIR548X2-201ENST00000579776 100 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
AP3D1O14617 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
AP3D1O14617 SNORD115-19-201ENST00000363098 82 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 SNORD115-18-201ENST00000363293 82 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 SNORD115-17-201ENST00000364612 82 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 SNORD116-18-201ENST00000383961 92 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 Y_RNA.400-201ENST00000383963 111 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 RNU7-48P-201ENST00000458875 63 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 RNA5SP227-201ENST00000516184 113 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 RNU6-1212P-201ENST00000517023 104 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 MIR548H5-201ENST00000580314 60 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 RNU7-10P-201ENST00000607194 63 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 TUG1_4.1-201ENST00000619464 181 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 AC244669.1-204ENST00000621564 178 ntBASIC0.22□□□□□ -2.37
AP3D1O14617 MIR101-2-201ENST00000362195 79 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 RNU6-804P-201ENST00000384286 107 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 MIR519A1-201ENST00000385257 85 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 MIR513C-201ENST00000401352 84 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 RNU7-2P-201ENST00000516096 62 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 AC138869.1-201ENST00000568623 124 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 AC105081.1-201ENST00000617727 106 ntBASIC0.21□□□□□ -2.38
AP3D1O14617 Y_RNA.98-201ENST00000363109 102 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 Y_RNA.127-201ENST00000363386 109 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 SNORA63.5-201ENST00000363548 123 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 RNU6-647P-201ENST00000364243 107 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 Y_RNA.398-201ENST00000383952 99 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 MIR569-201ENST00000385228 96 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 RNU6-1307P-201ENST00000391012 103 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 AC073261.1-201ENST00000429409 121 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 AP001328.1-201ENST00000528550 176 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 AC087741.2-201ENST00000619415 172 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 AP001362.1-201ENST00000625165 124 ntBASIC0.2□□□□□ -2.38
AP3D1O14617 Y_RNA.114-201ENST00000363265 113 ntBASIC0.19□□□□□ -2.38
AP3D1O14617 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
AP3D1O14617 Y_RNA.180-201ENST00000363867 113 ntBASIC0.19□□□□□ -2.38
AP3D1O14617 SNORD115-35-201ENST00000365122 82 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms