Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 Y_RNA.423-201ENST00000384057 113 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.476-201ENST00000384347 108 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.531-201ENST00000384589 121 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-588P-201ENST00000410281 105 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.651-201ENST00000459380 103 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 RNU7-123P-201ENST00000515911 60 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 MIR4752-201ENST00000579672 72 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 RNU1-29P-201ENST00000606574 126 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 AC091304.10-201ENST00000641554 121 ntBASIC0.09□□□□□ -2.4
SMIM28A0A1B0GU29 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 AC021443.1-201ENST00000604478 211 ntBASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 AC098479.1-201ENST00000609225 154 ntBASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 AC011603.4-201ENST00000611325 277 ntBASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.119-201ENST00000363301 96 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-312P-201ENST00000364629 107 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.337-201ENST00000365312 102 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 MIRLET7F2-201ENST00000385277 83 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 AC138907.4-201ENST00000570107 226 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 AC141273.2-201ENST00000618989 130 ntBASIC0.07□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-1307P-201ENST00000391012 103 ntBASIC0.06□□□□□ -2.4
SMIM28A0A1B0GU29 RNU7-164P-201ENST00000459221 62 ntBASIC0.06□□□□□ -2.4
SMIM28A0A1B0GU29 MIR101-2-201ENST00000362195 79 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 SNORD114-10-201ENST00000363409 72 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 SNORD115-24-201ENST00000363528 82 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 RNU4-84P-201ENST00000364200 139 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 MIR760-201ENST00000390220 80 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-1321P-201ENST00000390905 107 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 AC244505.6-201ENST00000452829 130 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 RNU7-129P-201ENST00000516128 62 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-1232P-201ENST00000516299 86 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.686-201ENST00000516548 134 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 MIR6844-201ENST00000637122 62 ntBASIC0.05□□□□□ -2.4
SMIM28A0A1B0GU29 SNORA9.1-201ENST00000362412 131 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.49-201ENST00000362714 112 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.144-201ENST00000363521 113 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-127P-201ENST00000390897 107 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 RNU7-121P-201ENST00000516604 62 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 RNU7-161P-201ENST00000517289 62 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.56-201ENST00000362798 112 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-1099P-201ENST00000363533 107 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.251-201ENST00000364551 99 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-309P-201ENST00000364573 106 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 Y_RNA.297-201ENST00000364950 91 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-463P-201ENST00000384340 107 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 MIR206-201ENST00000384872 86 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-239P-201ENST00000390990 99 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 MTATP6P21-201ENST00000440681 189 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 MIR3646-201ENST00000578301 84 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 MIR5190-201ENST00000581537 80 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 MIR4719-201ENST00000585233 84 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 AC108081.1-201ENST00000604358 221 ntBASIC0.03□□□□□ -2.4
SMIM28A0A1B0GU29 RNU6-726P-201ENST00000364680 107 ntBASIC0.02□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.298-201ENST00000364960 107 ntBASIC0.02□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.448-201ENST00000384185 108 ntBASIC0.02□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.644-201ENST00000459006 113 ntBASIC0.02□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.674-201ENST00000516362 113 ntBASIC0.02□□□□□ -2.41
SMIM28A0A1B0GU29 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU6-1104P-201ENST00000384723 104 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 MIR548H2-201ENST00000408874 88 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU4-69P-201ENST00000410677 143 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNY4P20-201ENST00000516678 93 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 AC072026.1-201ENST00000605023 201 ntBASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.01□□□□□ -2.41
SMIM28A0A1B0GU29 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.85-201ENST00000363014 111 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.240-201ENST00000364469 95 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 RNA5SP128-201ENST00000365305 116 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 RNU6-429P-201ENST00000384582 108 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 MIR643-201ENST00000385267 97 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.584-201ENST00000391090 114 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 RNU7-104P-201ENST00000459398 79 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.690-201ENST00000516603 95 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 DNAJC19P2-201ENST00000593340 302 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 SNORA70.25-201ENST00000612741 95 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 AL162376.1-201ENST00000624117 175 ntBASIC0□□□□□ -2.41
SMIM28A0A1B0GU29 RNA5SP403-201ENST00000363598 108 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU6-682P-201ENST00000363843 106 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 SNORD37.2-201ENST00000391075 66 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU7-48P-201ENST00000458875 63 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RPL39P34-201ENST00000477141 156 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 TRAJ51-201ENST00000504127 63 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU6-861P-201ENST00000516745 106 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 AP002392.1-201ENST00000537692 208 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 AC138869.1-201ENST00000568623 124 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
SMIM28A0A1B0GU29 RNU6-379P-201ENST00000363813 104 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms