Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.555-201ENST00000384673 110 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-476P-201ENST00000384726 107 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR206-201ENST00000384872 86 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 AL161932.1-201ENST00000437408 146 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 AL731563.1-201ENST00000442202 214 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.641-201ENST00000459414 105 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 AC025253.1-201ENST00000613623 543 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 AL138825.1-201ENST00000618587 192 ntBASIC-1□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-973P-201ENST00000364690 107 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-431P-201ENST00000383874 107 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 RNY1P6-201ENST00000384193 109 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 AL606845.1-201ENST00000404881 255 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 AC103591.3-201ENST00000608684 209 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 AC104985.2-201ENST00000620598 500 ntBASIC-1.01□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-845P-201ENST00000362578 103 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR582-201ENST00000365731 98 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR516A2-201ENST00000384888 90 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR516A1-201ENST00000385033 90 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU2-35P-201ENST00000516446 142 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORD116.3-201ENST00000517176 78 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORD58B-201ENST00000607313 66 ntBASIC-1.02□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU4-90P-201ENST00000362773 141 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 RNU6-570P-201ENST00000517051 105 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 SNORA40.17-201ENST00000517256 115 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 AC140658.3-201ENST00000567603 271 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 MIR6854-201ENST00000614935 69 ntBASIC-1.03□□□□□ -2.57
TRAV1-1A0A0B4J248 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.39-201ENST00000362620 98 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 MTND4LP30-201ENST00000454092 297 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-274P-201ENST00000459566 107 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 SNORA20.3-201ENST00000516880 132 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 AC009779.6-201ENST00000603972 165 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 AP001362.1-201ENST00000625165 124 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 AL606534.2-204ENST00000635008 178 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 U6.100-201ENST00000636230 99 ntBASIC-1.04□□□□□ -2.58
TRAV1-1A0A0B4J248 UBE2WP1-201ENST00000362030 340 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 SNORD81.2-201ENST00000365153 76 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU1-115P-201ENST00000365329 160 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 SNORD115-46-201ENST00000390982 71 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR1277-201ENST00000408536 78 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-850P-201ENST00000516934 103 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR376B-201ENST00000614515 100 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.05□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-211P-201ENST00000384047 107 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR548E-201ENST00000408287 88 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 SCARNA18B-201ENST00000458806 135 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 AC069439.1-201ENST00000494739 167 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-762P-201ENST00000517107 102 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR376A1-201ENST00000616574 68 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR382-201ENST00000637119 76 ntBASIC-1.06□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR616-201ENST00000385293 97 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 RNA5SP470-201ENST00000516463 106 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 AC084781.2-201ENST00000615568 161 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 AC087741.2-201ENST00000619415 172 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 AC022079.1-201ENST00000621546 602 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 TRDV1-202ENST00000621643 102 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 AP000770.2-201ENST00000623694 100 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 MTND4LP32-201ENST00000636111 270 ntBASIC-1.07□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-978P-201ENST00000364371 103 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 RNU6-326P-201ENST00000365480 107 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.08□□□□□ -2.58
TRAV1-1A0A0B4J248 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms