Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL359881.1-201ENST00000602916 267 ntBASIC-0.51□□□□□ -2.49
USH1CQ9Y6N9 AC084368.1-201ENST00000620935 65 ntBASIC-0.51□□□□□ -2.49
USH1CQ9Y6N9 AL162726.3-218ENST00000636401 95 ntBASIC-0.51□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 RNU6-429P-201ENST00000384582 108 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 RNU6-823P-201ENST00000391042 103 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 MIR1252-201ENST00000408861 65 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 RNU4-43P-201ENST00000410628 137 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 MTND4P19-201ENST00000446659 478 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.52□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 MIR516B1-201ENST00000385211 90 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 SNORD2.1-201ENST00000458762 69 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 TRAJ51-201ENST00000504127 63 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 SNORD67.1-201ENST00000516618 108 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 MIR4263-201ENST00000584745 83 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 AC037487.3-201ENST00000606668 112 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.53□□□□□ -2.49
USH1CQ9Y6N9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 SNORD114-10-201ENST00000363409 72 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 RNU6-978P-201ENST00000364371 103 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 SNORA25.7-201ENST00000364375 127 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 U8.6-201ENST00000364939 135 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 RNY4P3-201ENST00000365254 95 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 AC097635.1-201ENST00000450678 155 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 AC082651.2-201ENST00000496833 166 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 SERF1AP1-201ENST00000514575 187 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 MIR3920-201ENST00000581751 86 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 RNU7-10P-201ENST00000607194 63 ntBASIC-0.54□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 MIR599-201ENST00000385069 95 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU6-381P-201ENST00000391259 108 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 ELOCP20-201ENST00000422460 345 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RBMX2P4-201ENST00000441256 376 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 snoU13.19-201ENST00000459148 104 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 MIR1270-201ENST00000459320 83 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU7-70P-201ENST00000516941 66 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 RNU6-570P-201ENST00000517051 105 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 U6atac.1-201ENST00000616025 117 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 AC105081.1-201ENST00000617727 106 ntBASIC-0.55□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 RNU6-450P-201ENST00000364654 107 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 RNY1P6-201ENST00000384193 109 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 MIR624-201ENST00000385217 97 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 MIR519A1-201ENST00000385257 85 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.56□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU6-770P-201ENST00000363929 105 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU6-806P-201ENST00000365147 105 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 SNORA32-201ENST00000384072 121 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU4-70P-201ENST00000384579 139 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 MIR635-201ENST00000384830 98 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 MIR224-201ENST00000384889 81 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 AL603914.1-201ENST00000401964 204 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU6-735P-201ENST00000410612 107 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNU7-113P-201ENST00000459273 62 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 RNA5SP33-201ENST00000516687 98 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 MIR548AE2-201ENST00000583456 67 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 AC006504.6-201ENST00000590142 199 ntBASIC-0.57□□□□□ -2.5
USH1CQ9Y6N9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 RNU1-141P-201ENST00000364623 158 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 RNU6-728P-201ENST00000365375 104 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 AC093423.1-201ENST00000440817 142 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 AC090971.5-201ENST00000621102 293 ntBASIC-0.58□□□□□ -2.5
USH1CQ9Y6N9 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 1829.8 ms